Gene
| Gene Model ID | pfu_aug2.0_956.1_21293 |
|---|---|
| Locus | scaffold956.1 : 8777 ... 18825 : - |
| To GenomeBrowser | scaffold956.1:8777..18825 |
| Genes list of scaffold | scaffold956.1 |
| Synonym | pfu_aug1.0_39216.1_19709 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| soluble guanylate cyclase 88e-like | GO:0009190 GO:0016787 GO:0016849 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_956.1_21293.t1 | 1 | 1 | HNOB | 1 | 167 | 0.0 | 181.7 | 0.0 | 0.0 | 180.8 |
| pfu_aug2.0_956.1_21293.t1 | 1 | 1 | HNOBA | 203 | 439 | 0.0 | 244.2 | 0.0 | 0.0 | 243.4 |
| pfu_aug2.0_956.1_21293.t1 | 1 | 1 | Guanylate_cyc | 450 | 629 | 0.0 | 221.7 | 0.0 | 0.0 | 221.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_956.1_21293.t1 | gi|260827266|ref|XP_002608586.1| | hypothetical protein BRAFLDRAFT_268816 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_956.1_21293.t1 | gi|597780105|ref|XP_007253648.1| | PREDICTED: soluble guanylate cyclase 88E-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_956.1_21293.t1 | gi|657539634|ref|XP_008275964.1| | PREDICTED: soluble guanylate cyclase 88E-like [Stegastes partitus] | 0.0 |
| pfu_aug2.0_956.1_21293.t1 | gi|736190914|ref|XP_010771385.1| | PREDICTED: soluble guanylate cyclase 88E-like [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_956.1_21293.t1 | gi|657796612|ref|XP_008325331.1| | PREDICTED: soluble guanylate cyclase 88E-like [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_956.1_21293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_956.1_21293.t1 atgtatggtttacttcttgaagcgatcacccattgggtgcaatcaacctatggagaggaaaaatgggaggaaattcgcaa attggccagagttgacacagcctcgttcgcaacacatcagaggtattccgaaaaaatcattcccgatattgcacgtgcga gttcccttattcttggcctttcggaagatgacgttatggatgcctttggtgtgtgtttcgtgtctttcgtagggcagtac ggatatgacagaattttaagtgtgttgggccgcaacgttcgagattttctgaacggtttagacaacttacatgagtatct tagattcagctatccaaaattgaaaccgccatctttcttttgcaccaatgagagcagttccggtttgactctacattata gaagtaaacggaagggattcatacattatgttaaaggacaaatccgacaggtcggcgaagtgttctatcgaacgaaaatc aggatagacgtcgtcagcgccgaaactacagaaacgatgactcatgttatattcagacttcactttaacaatgctgcgta tcgggagaaattacgacgcgacacggaacttctagactacggaatgcctcttgactctgcagtgttcttcgagttgtttc ctttccatattgtgttctctcgaagcttggaaatacggagtattgggacagggatagctgctgttcttccacaagctaag gatcacaagctgaacgagatattcatcctagtcaggcctctcgtcaaattgcaatggaatgatataatggctcatacgaa caacgtctttgagttgagatcaatgtcagtgctgagaaagggcaggtcaacagaacacattattccacagaaagatgtta ataatgaaaccgtagcagactctgtcaacaacgaacgcactaacactatagtcgctcaaaacggtttaggtggtaatagc gatgccagtacagagtcatcagatgacgagatcgaggccagatatctccgtctgaaaggacagatgatgtttatggccga ctgggaggcaatcatcttcctagccacgcccataatggggaacttagatgccatgtttaaggcaggattgtacataaacg accttagcatgcacgactccagccgtgatctggttttagctggtactcaacaatcagcggagctgaagttagccctcgat caggaacaacgaaaaagtaagatattagaagagagcatgcgtcgcctcgatgccgagatgaagcgaaccgatcagttatt gtaccaaatgattccgaagcctgtagccgaccgactacgcaggggagaaccagctatatctacatgtcaggtatttgaga atgtgaccatcttgttcagtgacgtggtcggattcaccaccatttgtagccagatctcccccatggaggttgtatccatg ctcaacgcgatgtacaccaaatttgacaccctcagcgaaagacacggcgtatataaggtggaaacaataggtgatgccta catggttgtagctggagcaccagaaataacacagcttcatgcctttaagatatgtgatatggctctaggtatgatggaat caatgcaggagttacgagatccgtccactggaggtcatatgaagatcagagtcggtgttcacagtggtacagctgttgcg ggtgtagttgggataaaaatgccacgatattgtttgtttggtgatactgttaacacagcatctagaatggagacaaatgg agaagcgatgaaaatccacatcagtcaaacaacacatgaaagcatcaggacttttccttatgaatgtgaagagagaggaa gtgtcaacataaagggaaaaggcagcatgaaaacgtactggttgaaaagcaaaaacaatcaggctgagacttctggttgt ccctttgcaaacctcatcgacgacaaattggtgcaagaaaaggacaagaaaatcatgaagtcctctgacagttttgactt gcgcagtttatactccccagtttcttttgaagactgccagcaggtgtcccgtccacctacaggtcaccgtcacagcttaa atgacgaggctatagactcagctcgatctgagaagctttcaataaagaagcatcatacaaacggaagcaatggaattata acccataaaagtgtacacgataagaaagaacccgcgttgaagaagtcccacatatttcgattgacttctgacggaagaag cagcacgtgtataatactgtag |
|
Protein
| Protein ID | pfu_aug2.0_956.1_21293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_956.1_21293.t1 MYGLLLEAITHWVQSTYGEEKWEEIRKLARVDTASFATHQRYSEKIIPDIARASSLILGLSEDDVMDAFGVCFVSFVGQY GYDRILSVLGRNVRDFLNGLDNLHEYLRFSYPKLKPPSFFCTNESSSGLTLHYRSKRKGFIHYVKGQIRQVGEVFYRTKI RIDVVSAETTETMTHVIFRLHFNNAAYREKLRRDTELLDYGMPLDSAVFFELFPFHIVFSRSLEIRSIGTGIAAVLPQAK DHKLNEIFILVRPLVKLQWNDIMAHTNNVFELRSMSVLRKGRSTEHIIPQKDVNNETVADSVNNERTNTIVAQNGLGGNS DASTESSDDEIEARYLRLKGQMMFMADWEAIIFLATPIMGNLDAMFKAGLYINDLSMHDSSRDLVLAGTQQSAELKLALD QEQRKSKILEESMRRLDAEMKRTDQLLYQMIPKPVADRLRRGEPAISTCQVFENVTILFSDVVGFTTICSQISPMEVVSM LNAMYTKFDTLSERHGVYKVETIGDAYMVVAGAPEITQLHAFKICDMALGMMESMQELRDPSTGGHMKIRVGVHSGTAVA GVVGIKMPRYCLFGDTVNTASRMETNGEAMKIHISQTTHESIRTFPYECEERGSVNIKGKGSMKTYWLKSKNNQAETSGC PFANLIDDKLVQEKDKKIMKSSDSFDLRSLYSPVSFEDCQQVSRPPTGHRHSLNDEAIDSARSEKLSIKKHHTNGSNGII THKSVHDKKEPALKKSHIFRLTSDGRSSTCIIL |
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