Gene
| Gene Model ID | pfu_aug2.0_956.1_21295 |
|---|---|
| Locus | scaffold956.1 : 100306 ... 102693 : + |
| To GenomeBrowser | scaffold956.1:100306..102693 |
| Genes list of scaffold | scaffold956.1 |
| Synonym | pfu_aug1.0_15367.1_46873 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_956.1_21295.t1 | 2 | 1 | TPR_11 | 2 | 63 | 1.7e-06 | 27.5 | 2.7e-08 | 4.0e-05 | 23.1 |
| pfu_aug2.0_956.1_21295.t1 | 2 | 1 | TPR_2 | 2 | 30 | 7.0e-06 | 25.5 | 6.3e-08 | 9.4e-05 | 22.0 |
| pfu_aug2.0_956.1_21295.t1 | 2 | 2 | TPR_11 | 46 | 72 | 1.7e-06 | 27.5 | 0.0071 | 11.0 | 5.8 |
| pfu_aug2.0_956.1_21295.t1 | 2 | 2 | TPR_2 | 51 | 65 | 7.0e-06 | 25.5 | 0.57 | 850.0 | 0.3 |
| pfu_aug2.0_956.1_21295.t1 | 3 | 1 | Fic | 78 | 93 | 1.0e-27 | 96.6 | 5.6 | 8300.0 | -2.5 |
| pfu_aug2.0_956.1_21295.t1 | 3 | 2 | Fic | 177 | 273 | 1.0e-27 | 96.6 | 3.4e-30 | 5.0e-27 | 94.4 |
| pfu_aug2.0_956.1_21295.t1 | 3 | 3 | Fic | 317 | 341 | 1.0e-27 | 96.6 | 3.3 | 5000.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_956.1_21295.t1 | gi|524907832|ref|XP_005109027.1| | PREDICTED: adenosine monophosphate-protein transferase FICD-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_956.1_21295.t1 | gi|676465987|ref|XP_009057421.1| | hypothetical protein LOTGIDRAFT_163109 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_956.1_21295.t1 | gi|242015494|ref|XP_002428388.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_956.1_21295.t1 | gi|759171606|ref|XP_011376095.1| | PREDICTED: adenosine monophosphate-protein transferase FICD [Pteropus vampyrus] | 0.0 |
| pfu_aug2.0_956.1_21295.t1 | gi|586534706|ref|XP_006922236.1| | PREDICTED: adenosine monophosphate-protein transferase FICD [Pteropus alecto] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_956.1_21295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_956.1_21295.t1 atgaatttagctctggacatggaagcacaagggaaaagtgacaaggctcacaagttataccaacatgccttaaagctaga tccacaacatgtagatatattgacagcttatggagaatatcttgaacatcatgaacatgatatagttcatgctgatcata tgtacaaaagagctttatttctcagtcccacacacacaaaagctttagtgaatagggaaaggatatctccccttatagaa gaaatagaccaagccaacttcaacagaattgataaaaagttagaatattttgtaaaagtaccccgaaatcatccaggact tcgaagagcaaaaaaagaggcgtacttttcatacatttatcatacaaatgctatagagggaaacacattgactctgatgc aaacacgtgctattgtagaaacgaaaattgcaattggcgggaaaagtttacaagaacaaaatgaagtgctaggagtggat tcagctttaagctacatcaacaaaactttgctgggcaaagttggcaatatatctttacgtgatattttagaaatccataa acgcgtgcttggacacgttgatccccctgaggcaggcagaattagagacacacaagtttatgttggtgaatttattcccc ccactccaggggaagtgccaggactaatggaggaattcatagaatggttgaattcggaagatgctttaaaacttcatcct gtcgagtatgcagctatagctcattacaaactagtcgttattcatccattttatgacggaaatggtaggacttccaggtt actaatgaatctcattctaatgcaggctggataccccccaacttctgtcttagttcaagatcgtctcaaatattacgaga ccctagagcttgctaatgctggtgatattagaccctttatacggttcattgctgattgtacagaaagaactttagatgaa tttttacatgccactcatgaaaatgcgggtgccctgatggctaagttgaatgattcaacaaatgtgatatttactaaaga tgagttatga |
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Protein
| Protein ID | pfu_aug2.0_956.1_21295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_956.1_21295.t1 MNLALDMEAQGKSDKAHKLYQHALKLDPQHVDILTAYGEYLEHHEHDIVHADHMYKRALFLSPTHTKALVNRERISPLIE EIDQANFNRIDKKLEYFVKVPRNHPGLRRAKKEAYFSYIYHTNAIEGNTLTLMQTRAIVETKIAIGGKSLQEQNEVLGVD SALSYINKTLLGKVGNISLRDILEIHKRVLGHVDPPEAGRIRDTQVYVGEFIPPTPGEVPGLMEEFIEWLNSEDALKLHP VEYAAIAHYKLVVIHPFYDGNGRTSRLLMNLILMQAGYPPTSVLVQDRLKYYETLELANAGDIRPFIRFIADCTERTLDE FLHATHENAGALMAKLNDSTNVIFTKDEL |
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