Gene
| Gene Model ID | pfu_aug2.0_956.1_21296 |
|---|---|
| Locus | scaffold956.1 : 112857 ... 127465 : - |
| To GenomeBrowser | scaffold956.1:112857..127465 |
| Genes list of scaffold | scaffold956.1 |
| Synonym | pfu_aug1.0_16862.1_54351 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_956.1_21296.t1 | 1 | 1 | VWA_2 | 43 | 210 | 2.5e-16 | 60.2 | 1.7e-19 | 4.2e-16 | 59.5 |
| pfu_aug2.0_956.1_21296.t1 | 2 | 1 | VWA | 43 | 209 | 2.0e-31 | 109.0 | 2.6e-34 | 6.4e-31 | 107.4 |
| pfu_aug2.0_956.1_21296.t1 | 3 | 1 | CBM_14 | 267 | 319 | 6.0e-12 | 45.2 | 2.3e-10 | 5.7e-07 | 29.3 |
| pfu_aug2.0_956.1_21296.t1 | 3 | 2 | CBM_14 | 324 | 363 | 6.0e-12 | 45.2 | 7.8e-07 | 0.0019 | 18.0 |
| pfu_aug2.0_956.1_21296.t1 | 3 | 3 | CBM_14 | 443 | 465 | 6.0e-12 | 45.2 | 0.0027 | 6.7 | 6.7 |
| pfu_aug2.0_956.1_21296.t1 | 2 | 2 | VWA | 524 | 554 | 2.0e-31 | 109.0 | 0.78 | 1900.0 | -1.7 |
Transcript
| Transcript ID | pfu_aug2.0_956.1_21296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_956.1_21296.t1 atggattataaaatgttaattctagttatcttaatattctgtttgttggatatctcaatatcagctccccctggtggact aaaagtacattttccggcgacatctgacggatgcagggacttgctggacgtaattgtagtggtggatggcagcgacagta ttacatcaaaggattacgtcacactgaaaaactcattggtggacttgatggaccatctgacgttagccgaagaccaagct aggctaggagcagtactatacagcagtgacgtagccaatacactacctcttagtgccgaccgttcgtggcttaggaagtc actccttagtctccggcaccctagggatggcactcgaacagatttaggaattaaagccatgcgtgagatgttcaaaaccc aaggtcgaccggacgtacccagggtgggagtcgttgtcacagatggtatgtcaaaagatccaactcaaactgcgcgtcaa gcaaaactggcacgagatgagggtgttcgactttatgcagttggtgtttcacgcttcattgacgaggatgagttactctc tattgcttcaaatggaacaacagtctactcagcatccagtttcgatcaactgaagctcgtgttcgaatcattggttgtgc aggtttgtccaacaacaacgactaccacaactacaactacaacaacgactactaccacaccagctccaaccactaccacc actactactaccaccacaaccgtaccaactaccacacctaaacctaaaaacccatgtgatcaatgcaaaatgtccaatgg tgcaggatttactcggcatccaacagattgcgataagttcgtacagtgctactttggaaacaacgggctgaagaagatgg tatttcaacaatgtccatggggcaatttctgggagcagagttcattgacgtgcaagcccgcccacagggtccagtgccca acggataaatgtcgtgatccggaagtgcttacatatgaccttcccggaagttgtcgatctttctgggcatgcgatcaagg tgattcaattccaatgtgctgccccgaggggaccatgtatgcagagggaatcggctgcttgcctgatgaaaactgcaaag atccttgtccgcctaggccctcgggatatcagtccccgaggacgaaaaagaagttattatcccagctgagcaaagataag aaagaagcagtccttaaatctcttggagctccagtttctccgagtaaagtgattccgaaagtctgtgacaagaagccagt ctttgacgatccgagtcattttgaacagtttgtggacagatttggatgggtcaaaatgccttgtgccccaggaacagctt acgataccaaggattgtgaatgcaccgtgagagccaaatacactgcaactaaagaacaaacaggttgcaaagcaaaggta aagctgaattttacggaaggttttgaagacgaacgagacaaaaggccagtttatgttgtcaacaacaacgtcacatttgg acaaggcgtggctaagtttgatggaacgagtagattgcgcgtgcctcaactttcaaatgttgattacggagaagcagtgg ttctaaaaataaaattccgggagacacgagatacatctaataaagctcaagcaattataagtaacggggattgtggtaac aatgcctccatattggttgctaaggacgctgaaaagataacatttggcgctgaaacagttggtggtgaatatacacaagt tgaaataccaaagccaaaaacagaatggaagacagtgaaatatgcttacaatgacggcaggttacagggaaccgtaaacg gtcacagtaaatccgcatggataccttcaggtggtcgcattcaggcacgcccgtgtgctttacaaataggtcatggcgaa ggattaggggattttcaaggcgacattgaggatgccaatttcgaaattcgcaacaagccccgggttagtcctgtttacaa gactccggttctcttttccatgctgctgacaacgtactcgtag |
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Protein
| Protein ID | pfu_aug2.0_956.1_21296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_956.1_21296.t1 MDYKMLILVILIFCLLDISISAPPGGLKVHFPATSDGCRDLLDVIVVVDGSDSITSKDYVTLKNSLVDLMDHLTLAEDQA RLGAVLYSSDVANTLPLSADRSWLRKSLLSLRHPRDGTRTDLGIKAMREMFKTQGRPDVPRVGVVVTDGMSKDPTQTARQ AKLARDEGVRLYAVGVSRFIDEDELLSIASNGTTVYSASSFDQLKLVFESLVVQVCPTTTTTTTTTTTTTTTTPAPTTTT TTTTTTTVPTTTPKPKNPCDQCKMSNGAGFTRHPTDCDKFVQCYFGNNGLKKMVFQQCPWGNFWEQSSLTCKPAHRVQCP TDKCRDPEVLTYDLPGSCRSFWACDQGDSIPMCCPEGTMYAEGIGCLPDENCKDPCPPRPSGYQSPRTKKKLLSQLSKDK KEAVLKSLGAPVSPSKVIPKVCDKKPVFDDPSHFEQFVDRFGWVKMPCAPGTAYDTKDCECTVRAKYTATKEQTGCKAKV KLNFTEGFEDERDKRPVYVVNNNVTFGQGVAKFDGTSRLRVPQLSNVDYGEAVVLKIKFRETRDTSNKAQAIISNGDCGN NASILVAKDAEKITFGAETVGGEYTQVEIPKPKTEWKTVKYAYNDGRLQGTVNGHSKSAWIPSGGRIQARPCALQIGHGE GLGDFQGDIEDANFEIRNKPRVSPVYKTPVLFSMLLTTYS |
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