Gene
| Gene Model ID | pfu_aug2.0_959.1_31310 |
|---|---|
| Locus | scaffold959.1 : 146745 ... 191255 : - |
| To GenomeBrowser | scaffold959.1:146745..191255 |
| Genes list of scaffold | scaffold959.1 |
| Synonym | pfu_aug1.0_10158.1_39004 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_959.1_31310.t1 | 1 | 1 | Metallophos | 163 | 422 | 3.2e-16 | 59.3 | 1.5e-19 | 5.4e-16 | 58.5 |
| pfu_aug2.0_959.1_31310.t1 | 1 | 1 | CAP_C | 790 | 878 | 2.5e-06 | 26.9 | 1.5e-09 | 5.6e-06 | 25.7 |
| pfu_aug2.0_959.1_31310.t1 | 1 | 1 | TBCC | 813 | 931 | 1.82169e-44 | 149.9 | 0.0 | 5.1848e-44 | 148.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_959.1_31310.t1 | gi|676447383|ref|XP_009051390.1| | hypothetical protein LOTGIDRAFT_103457 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_959.1_31310.t1 | gi|260832874|ref|XP_002611382.1| | hypothetical protein BRAFLDRAFT_120329 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_959.1_31310.t1 | gi|156370052|ref|XP_001628286.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_959.1_31310.t1 | gi|696994946|ref|XP_009564287.1| | PREDICTED: protein XRP2 [Cuculus canorus] | 0.0 |
| pfu_aug2.0_959.1_31310.t1 | gi|706138945|ref|XP_010202556.1| | PREDICTED: protein XRP2, partial [Colius striatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_959.1_31310.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_959.1_31310.t1 atgaataaagcagcctacaagtgcatcgctttgacgctttcattagttttctttcacgcagtcgcacataccaatcatta tcaaggaacaacatatcatttttgcaaatattgcaaggatctcgttactctactggaatctaaggcttattctaacagca catttcaacgtatcagaccatttgcaatcgactactgcaaaaaagctcttaatgctctgggctacgagacaaaaacacaa tgtcctggtttgattgacctttatggacccgtggtccagtcagttctagtggattacacccttcagagttcatgtccatg tgaaaagcttaacttgtgcccggatgatgcagtctatatcacagccgccaacagaacaaagacagacaacagaacaaaat ggaataacaaaggaataaagcgaaaagtaaaattcaaacgacgtccatctcaaatgaattccaaagcaacgtctagtaat atagtacgagtcctccaagtatcggacattcatatggatataaaatacaaagagggatcgcctgcaaaatgtgacttttt cctatgctgtcgagggggaagcaatggaacggggaaagcagggaagtatgggacatacggttgtgatctacctcggcgaa ctgttgatgttgttttgaaaaatatacgaaagctccgtccaaaaccagacctcataatatatacaggcgactctccccct catgatgtgtgggatcagtcatacgctggtcagctgaaaacagaccgactggtcatcaagagacttaccaaggttctaca cggtattcctgtacttcctgcgctaggcaaccacgggacgtttccacaaaatttgtatagtccagatgatccatatttta agaaactgaacaagaagctagccaaccattggagaggtttattcccggagaggtcatcccagtggcgcagtattgtagca ggagcctactactcctacaatgtcagaccgggactccgagttatctcaatcaatacacagttctggtatacattcaactt ctatacactgacgattaacaaagccaaagtttatcgtaaacatcttaaattcataaggatgcacttgaggaaagccagaa aaaggaaagaaaaggtgattttgatgggacacatcccaccaggcgatgtaggttcaataaccttggcctacggcgatttc cacacagaaatggtgaacaagtttcacgacgttatagtgttgcaggtttttggacacacccatcttgatcaatttgaatt ggtgagtgcacgtgacgatatagatgacgtcaggggagtattgttcatagcaccttctgtaactacttattcaaagacta atccctctttccgtatgtatcatctggatggctcaagctaccagctccttgattatgagcaatacttcatgaatctcacc gctgctaacgattttggaaatatttcgatgaagaagttgtacagtgcgcaatcagagtataacctgactgacatgagccc agagtctttcttaactctctctaaaaggttagaggatcgtgacgacgaagtttttaccacatatcgtcgaaatatatcca ggctgcaaaccctgtttcagcagctggagaagattggagggaaagcagttagaaatcagacaagtacagaagacctacaa caaatcagatatgtaacatccaaaattcaccagattctcaacacacaggagaagcttcacagggatacagttctcaagaa tccatcatggatagaccttgttctcctcacactcaagaatacagcagacagatctgttcagctgaatctcattcaagtcc ttttagaattagctgggaaaacacaagtagggaaaagagtgggcattcttgttagtgccaacaccagcaatgtattgttc cagctgatctacagggaggcagaggatcaggcttcattggaggacacagtgatgctgtcacatcaagttctggccaagct ggcccaaaaagataggaaatttgccacaaaagcccgtttgaacagtgttctagtcataaccctgaacctcatcaaaaata acctgtataactttcggaatctgcagcctcttctccaagtcttcaaggcatatacaaacaacagtgtgaattcttcatat cttggcaaacataattccattccgcccatgttacgtgtcatacagcagtgtggtaggaagcatacagcagtcctcaaact agctctcgatatcctcacaaatcttacaaagtcacatgaggatatagcccctggggttgggatttttaaaattattttaa atgataaggcaaatgttgagatgataagggacagacctagaaattttgatccaaaagactttataatagaagaccagaaa gatgtcacagtgggtcgtgtacctggtaaagtgaatggacaacagtttgttattcaaaattgtgagaactgcaatatata catctttgatcacatagctacggttaccattgacaactgtaccaattgcaacattttccttggtccaataaaaaccagtg tattcatccgtaccagtaagaactgtaaccttgtggtggcatgtcagcagttcagaacgcgtgactgtaataaaatcaac atattcttattttgcggcacccagccgatcattgaagcctcatcagggatgaagtttgcatgtttccagtaccattatcc acaattagagggtcagttcaaatcagcgggactgagtgtcttttccaacacgtggggtaccatccacgatttcgaccaag atccctctgagcagcactactccaacctaccagaagggtcaaaggtcgaggactttatccccctccctcagaccgaagac ttctcctccatggtcatatctacgtcagaagcagacagtgtagtcccccttaccttgggaacacggcggaaaatttcaga tgagtcttgcctgattgtgttctttaatgatgggaataacacaaatagagctctcaattttttggattctatgtcaaaac ataagtgtttctgcagatga |
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Protein
| Protein ID | pfu_aug2.0_959.1_31310.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_959.1_31310.t1 MNKAAYKCIALTLSLVFFHAVAHTNHYQGTTYHFCKYCKDLVTLLESKAYSNSTFQRIRPFAIDYCKKALNALGYETKTQ CPGLIDLYGPVVQSVLVDYTLQSSCPCEKLNLCPDDAVYITAANRTKTDNRTKWNNKGIKRKVKFKRRPSQMNSKATSSN IVRVLQVSDIHMDIKYKEGSPAKCDFFLCCRGGSNGTGKAGKYGTYGCDLPRRTVDVVLKNIRKLRPKPDLIIYTGDSPP HDVWDQSYAGQLKTDRLVIKRLTKVLHGIPVLPALGNHGTFPQNLYSPDDPYFKKLNKKLANHWRGLFPERSSQWRSIVA GAYYSYNVRPGLRVISINTQFWYTFNFYTLTINKAKVYRKHLKFIRMHLRKARKRKEKVILMGHIPPGDVGSITLAYGDF HTEMVNKFHDVIVLQVFGHTHLDQFELVSARDDIDDVRGVLFIAPSVTTYSKTNPSFRMYHLDGSSYQLLDYEQYFMNLT AANDFGNISMKKLYSAQSEYNLTDMSPESFLTLSKRLEDRDDEVFTTYRRNISRLQTLFQQLEKIGGKAVRNQTSTEDLQ QIRYVTSKIHQILNTQEKLHRDTVLKNPSWIDLVLLTLKNTADRSVQLNLIQVLLELAGKTQVGKRVGILVSANTSNVLF QLIYREAEDQASLEDTVMLSHQVLAKLAQKDRKFATKARLNSVLVITLNLIKNNLYNFRNLQPLLQVFKAYTNNSVNSSY LGKHNSIPPMLRVIQQCGRKHTAVLKLALDILTNLTKSHEDIAPGVGIFKIILNDKANVEMIRDRPRNFDPKDFIIEDQK DVTVGRVPGKVNGQQFVIQNCENCNIYIFDHIATVTIDNCTNCNIFLGPIKTSVFIRTSKNCNLVVACQQFRTRDCNKIN IFLFCGTQPIIEASSGMKFACFQYHYPQLEGQFKSAGLSVFSNTWGTIHDFDQDPSEQHYSNLPEGSKVEDFIPLPQTED FSSMVISTSEADSVVPLTLGTRRKISDESCLIVFFNDGNNTNRALNFLDSMSKHKCFCR |
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