Gene
| Gene Model ID | pfu_aug2.0_9592.1_09725 |
|---|---|
| Locus | scaffold9592.1 : 5408 ... 7211 : - |
| To GenomeBrowser | scaffold9592.1:5408..7211 |
| Genes list of scaffold | scaffold9592.1 |
| Synonym | pfu_aug1.0_5520.1_59790 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase partial | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9592.1_09725.t1 | 1 | 1 | UCH | 5 | 292 | 4.3e-28 | 98.1 | 1.4e-31 | 7.0e-28 | 97.4 |
| pfu_aug2.0_9592.1_09725.t1 | 1 | 1 | UCH_1 | 7 | 267 | 2.4e-17 | 63.3 | 8.3e-21 | 4.1e-17 | 62.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9592.1_09725.t1 | gi|676476651|ref|XP_009060859.1| | hypothetical protein LOTGIDRAFT_234511 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_9592.1_09725.t1 | gi|291229600|ref|XP_002734761.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 38-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_9592.1_09725.t1 | gi|723541524|ref|XP_010310976.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 38, partial [Balearica regulorum gibbericeps] | 0.0 |
| pfu_aug2.0_9592.1_09725.t1 | gi|512815869|ref|XP_004911187.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 38 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_9592.1_09725.t1 | gi|260828462|ref|XP_002609182.1| | hypothetical protein BRAFLDRAFT_125949 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_9592.1_09725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9592.1_09725.t1 cgccaatggtgatgatgctaaaattcggacattgatagatcaaggttttggtggacagttagccacaacatatacttgtc tgacttgtggacatcagtcgtccagaaaggaggattttaccgatttaccgcttgcttttcctgagtacagacctgttgga tgtccatctgaagggaaagataaagacgacgatgggaagaaagaaaatggagatgtcgaaagcgaagaaaataagtcaaa gtcaagtacagagattaaatcgttgcatttaaatgatcttttacagtattacttaaagccagagagacttagtggtgata acaagtatttctgtgagaaatgtaactctttacaagacggagaaagaacactggatataatcagtgcaccagactgtttg atattgacacttttaaggttttcttacgacgttaagcttcagtctcgctcaaaaatttttcgggaggtgaaatatccaaa gacaatgattctgcccacaatgcaaaaacaggtgtcagagttaggtaaaacaaatcctcgacattcactacgagctgctg tgatggacagactggggaagtttgggttagagctcaacacggagaaaggggaggtttatagccttaatgctgtagttgta cactccggtacatcttcagaccatggtcattattacgcgtacgccagacactctatattctgtgatccacattctatctg tgatactatggacgattgcaaagaggaagatgaactagacttcctacaagacaagtggtacttgtttaacgataatcgtg tgtcgtacgccaaatatagctctttttctaatgttacaaaaagatttacaaaggatacagcctatgttctgatctacaag aggattgatcccagcaatgcagaaaagtcagaggtggatctgaatagctcgatccaccccagggaagttgatccccctct ttccagtaaactacgcacagctgtcagtaaagataatggcctatacctgcaggaacaggagctgtctgcaaagaagagga cggcacgtaaacggcagaatgtgaactcggcatcgtggtataactataaggatcctgacgacaacgacaaaggacctcca ggaagctgtggggggtcgtctggcttcaacaactcagggccaagatttgtgttctag |
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Protein
| Protein ID | pfu_aug2.0_9592.1_09725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9592.1_09725.t1 ANGDDAKIRTLIDQGFGGQLATTYTCLTCGHQSSRKEDFTDLPLAFPEYRPVGCPSEGKDKDDDGKKENGDVESEENKSK SSTEIKSLHLNDLLQYYLKPERLSGDNKYFCEKCNSLQDGERTLDIISAPDCLILTLLRFSYDVKLQSRSKIFREVKYPK TMILPTMQKQVSELGKTNPRHSLRAAVMDRLGKFGLELNTEKGEVYSLNAVVVHSGTSSDHGHYYAYARHSIFCDPHSIC DTMDDCKEEDELDFLQDKWYLFNDNRVSYAKYSSFSNVTKRFTKDTAYVLIYKRIDPSNAEKSEVDLNSSIHPREVDPPL SSKLRTAVSKDNGLYLQEQELSAKKRTARKRQNVNSASWYNYKDPDDNDKGPPGSCGGSSGFNNSGPRFVF |
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