Gene
| Gene Model ID | pfu_aug2.0_96.1_20208 |
|---|---|
| Locus | scaffold96.1 : 1 ... 17455 : - |
| To GenomeBrowser | scaffold96.1:1..17455 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_128657.1_21129 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20208.t1 | 1 | 1 | rve | 587 | 700 | 2.8e-22 | 79.0 | 1.4e-25 | 7.1e-22 | 77.7 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20208.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20208.t1 atgactgacttttcggaagatgaactccatgccattgctgcagcactcaaagagatgaaagtcaaacccaaagcagacag tgcatcagatcttaagcagtggatggtggattatgttactcagatgaagtcagatggaaccacaccagtacaagttaaac aagaagcagacactggtatgaagttgactgtctcatcaaggaaaagtaaagtgagggagtcatcgcacaatccatacgtc gttccttacgcggagatgcggggaagacttgaagaaatatctagaaaagccgttgagaaaggagcgacgaacagaaatga tgccaatgagaaacaaaaatcaagattttggaatgcgcttcaccaatggttaaaagacatcagtggttacaagtatgata ccatatcagactttgatgatttgaggaaggaggttcttctgatggagaatgaacatagcagcaagaaaacctacactaac atggtgattttagctactggagctacaggacagagtgatgaaatataccacctaaatctaccctctgagatacaacctgt caccatagaagacattgatatttgtaaaggagcccagccaactgacaacttattggacttagtgaaaatggaaagagaaa cattatcacaggaacaaatagaccttggagaaaaacttatccagaaatattccgatatattctccaaatctgacacagac attggacattcacacatggtcagacaccgcatagagctatatgatgacaccccatttaaacaacgttctcggagaatacc accttccatgtttaatgaagtaaagcaacacttgaaacagagtaaagtcaagtatgttggcaacatcgtctcagagagtg gaatagaaccagatcctgggaaaattgacaaagcaaccaactggcctacaccaaccaatctcgatgaagtccgcaagttt ttacgtttcgtaggctattatcgtcgtttcatcaagggattttcagacattgcaagacctcttaatgacctcttaccaga aggacagaagaaagcaaggaaaggagcgaagccaaaacctccacctgccaactggaagtgggactcagagcaagaaacag cttttaacactctgaaggaaaaacttacaacataccctatcctagcctacgcagactactctttaccattcgaacttcat acagatgcgtcatcaagtagcctcggagctgtactataccaaactcaagataatcagaagagagtcatagcatacgccag cagaataacatccagcccagttgacaacctatataacttaccagacttttcagagataaacatcaggcaacgtcagctgg aagaccccgtcatcagattttggataccttacgttaccaggaacatcaagcgatcaaaattccgcttaccttacagtaac atgcaacaccattctttgctctttaggaactttgacaaactccagatgaaagatggaatccttgtgagagagactattat caacaacagcaaaagatcacaaatcgccttacctcgttcttgcattcgaactgtattgtaccatcttcataacaacatgg gccatcctggcagagataaaactaccagcttagtaagggacagattcttttggtacggaatgacatccgatgtagaacac tataccaccaagtgtaaacgttgcgtaatgagaaagacaataactacagagcgagcaccattagtcaacataacaacatt ccaacctttagaattagtatgcttagactacctttcattagaatcatccaaaggaggttaccagaacattttggtgatta cagaccatttcactcgatatgcgcaagccattccaatcaagaaccagactgccaaaacaactgcagaagtactattcaac cattttatcctccattatggaatcccattgaaactacatagcgctcagggagcacaatttgagtccagaatcatcaagga actctgtaccatcatgggaatcaacaaatcaagaactactccatatcacccaatgggaaatggtgcgtgtgaaaggttta acagaacactactgaagatgcttggaacactggaaaacaaccaaaaacatgactggaagacctataaagctcccatagta catgcatacaactgtaccaggcaagaaacaacaagccaatcagtattctttttaatgtgtggacgagaaccaagactact agtagatatcgtatttggaaccaacaaacctgactcaaaaacaccactaaagaagtatatagagaccctaagatccaagt tacaacattcataccatctagctcaggaacatatcaagaaagcccaggacaaacagaaaaagacttatgacatcagagtc agaggagccattctacaaccaggagacaaagtattggtcaagattgtagcctgggatgggaacataaactatccgacaaa tgggaggaagatccatacataaggaggcattgtaaatgacagcgcacctgcccaggaatctgtatccttggagataccac agcatgaagacttagcacagagtcatgatatagatgctgaatcatccataacacccatccaagatgcagaggaagaagaa gactcagatgttagcagtgctgatgacgatcagactcctgcagcagctgaacagaccacagaacgtgaggaggacgcttc tccacttgacattccaagctcaagtacttctgtgcctgacaacagtgacgacatacaagattccggtactgtgaccgagg agagacaaccatcatctcggatcagaagaaaacctcagtggatgacaggaggggaatatgagatcagccagcaacagatg acaccagtaggacaacctgaatggaaatcgatgtaccaaagcacagaacaagagatggacttcaaatgtatcgtttatac tcttgttcttttctgtctatcagctttgagatcagaacttgctcttgagaaacaaaggaggggatctccaataacaccag gttgcagcacccacaaaacacccaatgcaaaaacacaaagcagacaagcacagaaagagacgcataagggacaaggaacg tcaacgtcaagacgaagggcctttatgagcgaagctcgcacttatg |
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Protein
| Protein ID | pfu_aug2.0_96.1_20208.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20208.t1 MTDFSEDELHAIAAALKEMKVKPKADSASDLKQWMVDYVTQMKSDGTTPVQVKQEADTGMKLTVSSRKSKVRESSHNPYV VPYAEMRGRLEEISRKAVEKGATNRNDANEKQKSRFWNALHQWLKDISGYKYDTISDFDDLRKEVLLMENEHSSKKTYTN MVILATGATGQSDEIYHLNLPSEIQPVTIEDIDICKGAQPTDNLLDLVKMERETLSQEQIDLGEKLIQKYSDIFSKSDTD IGHSHMVRHRIELYDDTPFKQRSRRIPPSMFNEVKQHLKQSKVKYVGNIVSESGIEPDPGKIDKATNWPTPTNLDEVRKF LRFVGYYRRFIKGFSDIARPLNDLLPEGQKKARKGAKPKPPPANWKWDSEQETAFNTLKEKLTTYPILAYADYSLPFELH TDASSSSLGAVLYQTQDNQKRVIAYASRITSSPVDNLYNLPDFSEINIRQRQLEDPVIRFWIPYVTRNIKRSKFRLPYSN MQHHSLLFRNFDKLQMKDGILVRETIINNSKRSQIALPRSCIRTVLYHLHNNMGHPGRDKTTSLVRDRFFWYGMTSDVEH YTTKCKRCVMRKTITTERAPLVNITTFQPLELVCLDYLSLESSKGGYQNILVITDHFTRYAQAIPIKNQTAKTTAEVLFN HFILHYGIPLKLHSAQGAQFESRIIKELCTIMGINKSRTTPYHPMGNGACERFNRTLLKMLGTLENNQKHDWKTYKAPIV HAYNCTRQETTSQSVFFLMCGREPRLLVDIVFGTNKPDSKTPLKKYIETLRSKLQHSYHLAQEHIKKAQDKQKKTYDIRV RGAILQPGDKVLVKIVAWDGNINYPTNGRKIHTXGGIVNDSAPAQESVSLEIPQHEDLAQSHDIDAESSITPIQDAEEEE DSDVSSADDDQTPAAAEQTTEREEDASPLDIPSSSTSVPDNSDDIQDSGTVTEERQPSSRIRRKPQWMTGGEYEISQQQM TPVGQPEWKSMYQSTEQEMDFKCIVYTLVLFCLSALRSELALEKQRRGSPITPGCSTHKTPNAKTQSRQAQKETHKGQGT STSRRRAFMSEARTY |
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