Gene
| Gene Model ID | pfu_aug2.0_96.1_20210 |
|---|---|
| Locus | scaffold96.1 : 38749 ... 43755 : - |
| To GenomeBrowser | scaffold96.1:38749..43755 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_19462.1_61916 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20210.t1 | 1 | 1 | PHD | 90 | 140 | 7.8e-07 | 28.6 | 6.4e-10 | 1.6e-06 | 27.7 |
| pfu_aug2.0_96.1_20210.t1 | 1 | 1 | Exo_endo_phos | 203 | 354 | 7.4e-08 | 32.6 | 5.0e-11 | 1.2e-07 | 31.8 |
| pfu_aug2.0_96.1_20210.t1 | 1 | 1 | Exo_endo_phos_2 | 299 | 412 | 4.7e-11 | 42.3 | 4.4e-14 | 1.1e-10 | 41.1 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20210.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20210.t1 atgaacttggcaaccgtaattgtgtttacgttcctgtggctattttttgctaacgtgaacgaaataaaaccatcaaattt ttcccaaaccggacataactttagatccatcagtttccatgtacttagtcataaaccctcagcgcacgggtcaaagcctc tattgaaacgtagcaaacatgaccacttgctctatttgagtttattgttactcctccagtcagcggactgtgaacttaac cctgggccccgaccaccgaaatatccctgccagatatgcaacaaagcatgtaaatggggtcagcgagcaatagcttgcga taactgtgatatgtggtaccacataaattgtatgggaatgaacagccaagtctaccaacaccatgcacaccccgatataa gctggatttgttgcaaatgtggattgcctaatttctcgacatcactcttcgactcattcgttgttgatacatcaaactct tttgacagcttaaacgagacacacctgtccagcacaaatgatattggtttaccattacattcttcatcaccaaaaccaac aagagttaaagaaaagggtaacgagcacaacaattttcggatcgtctctcttaacatgcagagcatccgtgctaaaaagg caagctttttcaacctagtagattctgcaaatcctgacgtgatagtaggcacggaaacatggctaaagccagatatacat gatagtgaaatacttccaccgggatatatcactcgtgctaggagagacagaaaagacggctatgggggagtgataatcat aaccaagtcaaccattagcagcgacgaactcctagtatcccagtcatcagaattagccgctatatcagtaaacagggaaa ataaaccacctcttgttatcgcagcttattacaggccatctggtagctctcttgaagaggcagaagctacttgtaatgag ctctacaatttaacaagtgaacatccaaaatctccattctggctcacaggtgatttcaacctacctgacatatcatggac cgacaactccgtaaatggaaacaagaatgctgtagtcataaacaacacctttttggatactatagccgatattggcctcg ctcagatggtagagtcccccaccaggaaggatgccatactcgatctatttttgacaaaccggccttcacttgtaaaccgc cttaaagtgatcccagggatcagtgaccatgaggccctgttcatgatagtgatgtacagccagccttggattactcgtaa catcaaacgtctatcaaggaagaaaaataaagcatacagacagtacagaaagactcattcaaatcatgactattccacct acaaaagcataaaaaatgtagtccattccgagtttctgagggtaaccaaccgcaaatctcccctgcatgccgactacacc atccacggccatacactcaacactgttgactctgccaagtacttgggcttgaccatcaccaagaaccttagctgggacac ccacatagatagggtcaccaagaaagcgaattccaccttagctttcctcggaaggaacatcagtaaatgcccaactccca tcaaggcacagtgctactccaccctagttagaccaaccatcgagtatgctagttgtgtgtggagcccagctaagagggag actatcaacaagctggagagagtccaacgaagggcagccagatttgccactggagattatcagcgcacaagcagtgtaac agccatgctacagcagctccagtggcaaccgctccaagtcagaagagaaacatcccaggtggtcatgctatacaggatag tgtacaacctagtagacatacctgctgacagctacctccagaagacagcattgaggaccagaggccacaccctccgctac cttgtaccacacaccagaacaacagtgtacaagatctccttcttcccccaggccatcagactctggaaccagctaccagg aggagtagtggaggccaccactttggacagctttacgacccagctgtccaacgcctcagtgtattag |
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Protein
| Protein ID | pfu_aug2.0_96.1_20210.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20210.t1 MNLATVIVFTFLWLFFANVNEIKPSNFSQTGHNFRSISFHVLSHKPSAHGSKPLLKRSKHDHLLYLSLLLLLQSADCELN PGPRPPKYPCQICNKACKWGQRAIACDNCDMWYHINCMGMNSQVYQHHAHPDISWICCKCGLPNFSTSLFDSFVVDTSNS FDSLNETHLSSTNDIGLPLHSSSPKPTRVKEKGNEHNNFRIVSLNMQSIRAKKASFFNLVDSANPDVIVGTETWLKPDIH DSEILPPGYITRARRDRKDGYGGVIIITKSTISSDELLVSQSSELAAISVNRENKPPLVIAAYYRPSGSSLEEAEATCNE LYNLTSEHPKSPFWLTGDFNLPDISWTDNSVNGNKNAVVINNTFLDTIADIGLAQMVESPTRKDAILDLFLTNRPSLVNR LKVIPGISDHEALFMIVMYSQPWITRNIKRLSRKKNKAYRQYRKTHSNHDYSTYKSIKNVVHSEFLRVTNRKSPLHADYT IHGHTLNTVDSAKYLGLTITKNLSWDTHIDRVTKKANSTLAFLGRNISKCPTPIKAQCYSTLVRPTIEYASCVWSPAKRE TINKLERVQRRAARFATGDYQRTSSVTAMLQQLQWQPLQVRRETSQVVMLYRIVYNLVDIPADSYLQKTALRTRGHTLRY LVPHTRTTVYKISFFPQAIRLWNQLPGGVVEATTLDSFTTQLSNASVY |
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