Gene
| Gene Model ID | pfu_aug2.0_96.1_20216 |
|---|---|
| Locus | scaffold96.1 : 106094 ... 147005 : - |
| To GenomeBrowser | scaffold96.1:106094..147005 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_554.1_15118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20216.t1 | 1 | 1 | zf-C4 | 20 | 87 | 7.7e-22 | 77.3 | 3.7e-25 | 2.8e-21 | 75.5 |
| pfu_aug2.0_96.1_20216.t1 | 2 | 1 | Hormone_recep | 353 | 445 | 8.5e-06 | 25.0 | 1.5e-08 | 0.00011 | 21.4 |
| pfu_aug2.0_96.1_20216.t1 | 2 | 2 | Hormone_recep | 698 | 760 | 8.5e-06 | 25.0 | 0.031 | 230.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20216.t1 | gi|676490023|ref|XP_009065135.1| | hypothetical protein LOTGIDRAFT_155319 [Lottia gigantea] | 9.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20216.t1 atggactcgacatctaccaaagacagtcagaaatcagggagtcctctagagtacccaccctgtaaggtgtgtggagggac aggggccggtaaacattacggtgtacacacctgtcaaagctgtaagacgttttttagacgctacttgaaaagagagaagc catatgtatgtgtcggtaatgccgattgtaaagtggtcaactcaagtcgtggtaactgttcagcatgccgagccaaaaaa tgccaacaggtcggaatgtcagtcggaggaatcaaaatcggaaggcgtacacttaaggaaagaaacaaaacaattctggc agtgaaagaattgcaaacagaacaagagaaaacaaggaccagatatgaaattctgcgatcggaagctcaaaagcgattaa cagatctacgaagagatcgtcccaatttagtgaatctctatccatgggagataaatgatgatcaagaaaagataaatccg aacgattgtaaggaatgtaaagctattggtacagatgatgagatcgtccattcagagaacgcctacagtaacagaagcaa gtcatctaatgacagtcataacgacaatgacgatgatgatgacctgttagctgaacttttagaggagagtgataacttgg tctcgttatcgacaattacagatatatctgataatgtcaatgacgacatggacttttactctttgtccccaagaagccta caggaatgctttacacagttcatggagtggacagaggaagaaagccatctcctctatcagaagacagagacacagaaact acctgacgatatcattcaagatcttgtcgatggttttaaagaaattaaagtgcactctcatctaacggatgatgaaatta tgaataagattcgagaggaatatgacaagatgcagttaacgacagctgctataggacctatgggagtcatgacaaatgag gaatacataaactttttctcaactaccggattcgacatagaaggcagatcaaaacagttgagaagatttacctcccaagt agctccgttcctaagaagaattttaaaatttgcacataaaattcccggatttaaatcactaataccaaaagacagagctt cgttaataaaagcatcaaagagcgaagttcaagtacttatgttgaacagagccgtggatcctgaccttgagatgtggatg gtttggtgtggagacgtgttggacgtcaatagatcctggatgtttggaagcattgagaataggaaaaagtggttctcatt ggctaaggaaacacgtgatctcaatctctcgactgaggaaatggcagtcgtcatgggcatgtctatgacatttactgagt atagtgcatggtcgctttactcgtcagatacatcatgttatctgtggaatctggagccgaatctcaatcaaaaaatcaag gatctgttaaaagaaggatcatggattttcaacctgcgctttgtaatcaacggtaaatcagacatcattctgaaaggtga caacggaacaatgttgtatcaaccgctgcagtggataagaactaaaggcaaaggcggtacagaacttttaatattaaaaa ggaaactcttgaaaactatttccgtttctacggcgacattcggtatcaaaattgatgatgtaatcgtcaacgtcacggac aaaccaagaggatgcctgtccaagttgaatggtcaagagtatgaaacactggtcagggactttttgcttcataatttcag gggtccgaaggaaaggaggggaattgtaaatgggaaaaaggaaaaggaagcttcgctcggagaaaatgaaagaatatgca acatgcgactcaatcctcataatattgaccatctaacatcgtattatgaatgctgccagttaagggatgaagaaatcaaa tgtaaaaagctggtgatagaatttctattgagcattctggttgtgtgtttaaatttgtttgaattcattgctcttatgtt tgcgccaatggttatccccaaatcctacttcaaagagaaatttcgaacttacgtatatgaacattatctcaaagtacctg tttcaatattggccaaaaaagattcaatacgacatccagaaaaggaaaccgaccatactgtgtccgtgtcaaaaatatgt ccggatgtcatgccgaagtttggtaacactttaaacaagatgaaagaagggtccatttataaactccaactctccaaaat agaattttacgttaaatctggccagctagtaaccaaaagtaaatctcctataagtctactcaattcaatgtacgaatccc tcgtcttgtgcaagatcagaaagaaaacatcagtgatgaaatgctgcaaagcaaacatgtttggaggcaagagatgtgtg tttaaccgagtacaattaacgtggtatcaatgtcttcgaggtcttatgaacttgttgttcatgttgatgttatgcctgcc atgggtcgcccggactatggtcatttacaattatgaacgagaagatattacgactaacaacacatatcagagaacgggct ggattatacagtcttcataccggttatcgtatgttagtccgctgcacgttgcttttctcatttgctatattttcttgctt tgtgaaggtgtcttacttggttacatcagtaagcatgttacacgtatgctcagaatggtcatccggaagtgtttccaaga tatgaaaaacacctcgagagcccatgtaattggatggttctttcgacttttgttaaaacctttgactcactttggacttt gtggaatgttcatacttccattccattttgtggttgtcacacctttcgctcttgttgtcatgacaatgtactttctacct acgtttaacattgtcatgaggcttattctgtactctttgtttcattctgttctgaaaagcaatttgaaaattgtaaaata taggcaaggtactacgtactgccaattcctcttctcatttttttattttgagtatctcttaggaagagaatacctcatga aagagaattctgttcctaaaataaagtccagagttatccaaataccggtagcggttataagcttagtgtgcgttttgtcg tttacgttattggctatggagtttcttgtatttttctttgagtatattatgttaaccatgattggaatcattcttaacgc tacctttgccatggagtacgtttctatattagttatggtcattgtttacggtaaagaatgtttcagtggtgttacacaga aatacagctcgttcaactccgatatacatgagttcgtccttgacaaattgaggaaagaaatgaaagtaattgccgctcaa gacgaagccgaacaaaataacaccgcatttgtactacctttgccgtcaatggctagttcaaacctcaatattcttattga agatgaaatttcgatagacgacgaacctttgaaaaaagaagtggcgcaaaattcaaaaagtatagatgattttgtacgcg agaaagatggaaacatgtcatccgaaccgaccttcgtagtaaaggatggtattccaaaatggaaaaccagacagcttatc ttttttcttgatcgcaaagacacgacttgcatcactgagaagtttttctttcaaacggtgaacatgcctcattcaggtgg accaggaaatcttccatcgaacgtaatttccgctcttgcgcagtttttggttactctggtattcctactgtttgttatcc tcattgtgatgatatttggaagccagtacaatgtttctgacttaaaccagatcatagctacgttactaacaggttttctt cctttgcttgttaaaatattcattttcaaacctaagggaaacttatcagttgacacagagaatgtgaatttccaaaattc ctttgaaaatgtggtaagaaaatacaaacaaacctgggagattgctgatctgactgtggacaaaatggaagaagtattag atggagaaatgaaggaggcggacgagaaaattaaagaaagcggaagcgaggaggatatttcgaaaaatgatgagcgtgta gattttgataaagaaaatggagacaagaacgatgaccatgtgaatgacatagatctagtaatcaatatcaatcgccattc acacaaagttttccatgttgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_96.1_20216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20216.t1 MDSTSTKDSQKSGSPLEYPPCKVCGGTGAGKHYGVHTCQSCKTFFRRYLKREKPYVCVGNADCKVVNSSRGNCSACRAKK CQQVGMSVGGIKIGRRTLKERNKTILAVKELQTEQEKTRTRYEILRSEAQKRLTDLRRDRPNLVNLYPWEINDDQEKINP NDCKECKAIGTDDEIVHSENAYSNRSKSSNDSHNDNDDDDDLLAELLEESDNLVSLSTITDISDNVNDDMDFYSLSPRSL QECFTQFMEWTEEESHLLYQKTETQKLPDDIIQDLVDGFKEIKVHSHLTDDEIMNKIREEYDKMQLTTAAIGPMGVMTNE EYINFFSTTGFDIEGRSKQLRRFTSQVAPFLRRILKFAHKIPGFKSLIPKDRASLIKASKSEVQVLMLNRAVDPDLEMWM VWCGDVLDVNRSWMFGSIENRKKWFSLAKETRDLNLSTEEMAVVMGMSMTFTEYSAWSLYSSDTSCYLWNLEPNLNQKIK DLLKEGSWIFNLRFVINGKSDIILKGDNGTMLYQPLQWIRTKGKGGTELLILKRKLLKTISVSTATFGIKIDDVIVNVTD KPRGCLSKLNGQEYETLVRDFLLHNFRGPKERRGIVNGKKEKEASLGENERICNMRLNPHNIDHLTSYYECCQLRDEEIK CKKLVIEFLLSILVVCLNLFEFIALMFAPMVIPKSYFKEKFRTYVYEHYLKVPVSILAKKDSIRHPEKETDHTVSVSKIC PDVMPKFGNTLNKMKEGSIYKLQLSKIEFYVKSGQLVTKSKSPISLLNSMYESLVLCKIRKKTSVMKCCKANMFGGKRCV FNRVQLTWYQCLRGLMNLLFMLMLCLPWVARTMVIYNYEREDITTNNTYQRTGWIIQSSYRLSYVSPLHVAFLICYIFLL CEGVLLGYISKHVTRMLRMVIRKCFQDMKNTSRAHVIGWFFRLLLKPLTHFGLCGMFILPFHFVVVTPFALVVMTMYFLP TFNIVMRLILYSLFHSVLKSNLKIVKYRQGTTYCQFLFSFFYFEYLLGREYLMKENSVPKIKSRVIQIPVAVISLVCVLS FTLLAMEFLVFFFEYIMLTMIGIILNATFAMEYVSILVMVIVYGKECFSGVTQKYSSFNSDIHEFVLDKLRKEMKVIAAQ DEAEQNNTAFVLPLPSMASSNLNILIEDEISIDDEPLKKEVAQNSKSIDDFVREKDGNMSSEPTFVVKDGIPKWKTRQLI FFLDRKDTTCITEKFFFQTVNMPHSGGPGNLPSNVISALAQFLVTLVFLLFVILIVMIFGSQYNVSDLNQIIATLLTGFL PLLVKIFIFKPKGNLSVDTENVNFQNSFENVVRKYKQTWEIADLTVDKMEEVLDGEMKEADEKIKESGSEEDISKNDERV DFDKENGDKNDDHVNDIDLVININRHSHKVFHVV |
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