Gene
| Gene Model ID | pfu_aug2.0_96.1_20218 |
|---|---|
| Locus | scaffold96.1 : 173685 ... 195547 : - |
| To GenomeBrowser | scaffold96.1:173685..195547 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_554.1_15122 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20218.t1 | 3 | 1 | MBT | 617 | 688 | 0.0 | 178.5 | 5.4e-26 | 1.3e-22 | 79.4 |
| pfu_aug2.0_96.1_20218.t1 | 3 | 2 | MBT | 728 | 795 | 0.0 | 178.5 | 2.2e-13 | 5.3e-10 | 39.0 |
| pfu_aug2.0_96.1_20218.t1 | 3 | 3 | MBT | 842 | 919 | 0.0 | 178.5 | 1.1e-18 | 2.8e-15 | 55.9 |
| pfu_aug2.0_96.1_20218.t1 | 1 | 1 | DUF3588 | 992 | 1105 | 1.7e-31 | 108.7 | 2.8e-34 | 6.9e-31 | 106.7 |
| pfu_aug2.0_96.1_20218.t1 | 1 | 1 | SAM_1 | 1188 | 1250 | 9.9e-08 | 32.0 | 8.4e-11 | 2.1e-07 | 31.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20218.t1 | gi|524913338|ref|XP_005111500.1| | PREDICTED: scm-like with four MBT domains protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_96.1_20218.t1 | gi|260837210|ref|XP_002613598.1| | hypothetical protein BRAFLDRAFT_226942 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_96.1_20218.t1 | gi|719753187|ref|XP_010213710.1| | PREDICTED: scm-like with four MBT domains protein 2, partial [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_96.1_20218.t1 | gi|632978313|ref|XP_007905839.1| | PREDICTED: scm-like with four MBT domains protein 2 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_96.1_20218.t1 | gi|701390650|ref|XP_009966419.1| | PREDICTED: scm-like with four MBT domains protein 2, partial [Tyto alba] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20218.t1 atggattcaaaagaaagtaaggcagatgacactgaattagcaccagaaagcaacattgacaatgaacaactagggaatca ggatgctgacatgatggatatagatgagtttgaacatggtctgggagacatggccagtgagaagctactggaagtcaagg agatgaacgttcaacagagtcgtcatctgacatcagaaaatctagctgaagattgtaacgtgttagatactcccagtttg acaacagatgtagcctcatcatgcattgaccatcaggtttctgacttgtgtactaatgctgaggctcctgattatgttac cagtgaagcattgataagtcagagcagcgcagaatcacagtctccattaactggtcagacacatgaagtattgcctcaca tagaaggacaagaaaagcttacagagtgtgatcaggaactaacctcacaatcatccccagtctgtcagctcaaatttcaa gacacaggttccctaccacctggattggatatattgtctagtaatcttactggtccatcagcagtggaaaatgccatgaa tccaacatctcaaaatcaggacttattatccaaaacagtgctagattctcctgtgtctttggatccaaaagcagaatgta cagactcagagtcaattttatatcaaagtgaaaatggagatttgtctttgcctgtggtttcttcagcagaagtaatgaaa acatctgccgtggaaccaacagaatcatcacattcagtgtactctgcatctaagaacatggactctcaaattctggtaga ttcaacattgacagtcaaagagtcatctctctctgctgaatccacaccttcaggtaatgatgtaaatgtatctcatcagt ctgatcacagtggtacactcaatgaattatcgctgtctgttgatgcaaaaactgtgaacactgactgtgcatccttgaca gatccttctgagatggcttccacacacaggagactgaaggactctattataaattccacattaaacaatgactctgcact ttcttgtgtaagtaacatggatatatcactacccgaggattcaaaagaatcaagtgcagatccctctaaatctgcagaat ttactagttcagaactttcttgccctgtggattccatagaacaaagtgacaaatccacttttcctatggattccaaggaa caacgtgagagcccctctctccttatggatcctacagaacaaaggaggaactctactctccctgtggaatccatagaaca tagtgataacttcactctcccttctcctattgattccacagagcaaaatactaaactcacttcccatatagaaagtgcag aaccaagtgctgatgcaacttctcctatggaattaagagagcaaagtgatactcctaagaataatgataaagaatctctc tctgagtgtgctctgcctggggatttcacagaaacaaacatgaatctcattccacctttggatttcaaagaaacaagtgg aagtcccagcatgtcagttgaatctgctggatctagagctgacaactgttcacccgtggaatcgggcattggatctttac tccctgaggaaccattgccacagtttcatagggacagcagttatgattcaaatggaaaaactgttggagatacagcaaaa gtaaacatccaagagactgctcaagaagtgaaagagagtgttcaaacggataatgaagaagctgagtttacctgggagac ttacctggaacagactggatctgtggcagctccaccacaggcattcaaacatgttgagttaagtctggagagtggattta ttaaaggaatgaagctagaggttccaaacaagtgtactgaggatacttactgggtggcctccgtagtcatgacatgtggt cagttactacggttacgctttgatggttacgaggatgataaatctgcagacttttggtgtgaccttatgacctcagaaat ccacccaattggatggtgtgctcagaataatcaagttctgcaacctccagaagaaatcaaggacaagtttgatgattgga gagaattcctggtgcgatccttgacaggggcaagaacagccccatcctatctactggataagactacaggtataacaccg gttgaccagttgaaaccaggtatgcgtctggagatacagcaccccatcagtcctgtggaggtttggtttgtaactattat agagaacgtcgggggacggctgtatctgagatttgagggagtagagtcagggggacatgacttctggttgttttatctta atcaccgacttcaccccctgggctgggccaaaactcagggattcacatatagacctccaaaagagctgtttttgggagaa gagaatttaaagttggaggaaacagtacagaccattttacaagatgatgagcagtctacattttgtcacgctattttcag ggaccaagaggagattccgtctcatacattccaagtcggccagaagcttgaagctctttccccgatacaccggtgccaag tatgcccagccacagtaacggaagtcctggatgataattactttgttgtggagattgataacatgagtaattcttcgtcc gatttcctaattcggttttcctgtcatgccaaatctaaagtcatctttccgtgcctgtggtgtcataataatggagtgaa gatcacatcaccaaaaggttggcagaaatcagaatttagctggtctgagtatctcaagtactgtaatgctactgcagctc cacagtcatgtttccctacagttggcagaaatcagaatttagctggtccgagtatctcaagtactgtaatgctactgcag ctccagagtcatgtttccctacagacaaggaattggtcaaatgaggcattcacacagatgaaattaggccaagagacagg tgactggtgtcctaagatatactacaaccaccgatgtttttctggaccgtccctcagtaagggtcgtatagcagcattac ccaagtttgttggtcctggccccatggttctcgttatgaaggaagttgtatcaaacctaatcaatgtggcatacaagtca tgtcaggttctacgagatctacagctagaggggaaaccaaacccaaacatgcttcaacagaccatcaaggcaaagtacaa aggtaaaagttaccgtgctatagtagagctctgtaaggagacttcacagctccaggaattctgccgttatatttgctcaa aactagaatgctgtcctaacctgatcagtactaccaactatcatgactcgtgtcctgaaaactgtggactacaaaccaag actcaattccaaatcaaaacaaggggagcaaagttaccaaaatacagctacgatcggaagacacacaagaaaatcctcct tgctcatcgatcccatgacgacggcagtcacaaggtcaaggtccatagagctgatgggactaagaagcaccacaatacct ctgtagtcaaaccagaacttatcttaaacagtaatcctctatactggagtgtcaatgatgtagttagttatataaaatct acagagtgtgctcagctagccaggctactcaaggaacaggatatagatgggcaggcattgctactcttgtcactacctgt attacaagaatacctggacctgaaactgggaccggccatcaaactatgtcatcatatagaaaaaatcaaactggcattct atagacagtatgctaatctatcctga |
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Protein
| Protein ID | pfu_aug2.0_96.1_20218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20218.t1 MDSKESKADDTELAPESNIDNEQLGNQDADMMDIDEFEHGLGDMASEKLLEVKEMNVQQSRHLTSENLAEDCNVLDTPSL TTDVASSCIDHQVSDLCTNAEAPDYVTSEALISQSSAESQSPLTGQTHEVLPHIEGQEKLTECDQELTSQSSPVCQLKFQ DTGSLPPGLDILSSNLTGPSAVENAMNPTSQNQDLLSKTVLDSPVSLDPKAECTDSESILYQSENGDLSLPVVSSAEVMK TSAVEPTESSHSVYSASKNMDSQILVDSTLTVKESSLSAESTPSGNDVNVSHQSDHSGTLNELSLSVDAKTVNTDCASLT DPSEMASTHRRLKDSIINSTLNNDSALSCVSNMDISLPEDSKESSADPSKSAEFTSSELSCPVDSIEQSDKSTFPMDSKE QRESPSLLMDPTEQRRNSTLPVESIEHSDNFTLPSPIDSTEQNTKLTSHIESAEPSADATSPMELREQSDTPKNNDKESL SECALPGDFTETNMNLIPPLDFKETSGSPSMSVESAGSRADNCSPVESGIGSLLPEEPLPQFHRDSSYDSNGKTVGDTAK VNIQETAQEVKESVQTDNEEAEFTWETYLEQTGSVAAPPQAFKHVELSLESGFIKGMKLEVPNKCTEDTYWVASVVMTCG QLLRLRFDGYEDDKSADFWCDLMTSEIHPIGWCAQNNQVLQPPEEIKDKFDDWREFLVRSLTGARTAPSYLLDKTTGITP VDQLKPGMRLEIQHPISPVEVWFVTIIENVGGRLYLRFEGVESGGHDFWLFYLNHRLHPLGWAKTQGFTYRPPKELFLGE ENLKLEETVQTILQDDEQSTFCHAIFRDQEEIPSHTFQVGQKLEALSPIHRCQVCPATVTEVLDDNYFVVEIDNMSNSSS DFLIRFSCHAKSKVIFPCLWCHNNGVKITSPKGWQKSEFSWSEYLKYCNATAAPQSCFPTVGRNQNLAGPSISSTVMLLQ LQSHVSLQTRNWSNEAFTQMKLGQETGDWCPKIYYNHRCFSGPSLSKGRIAALPKFVGPGPMVLVMKEVVSNLINVAYKS CQVLRDLQLEGKPNPNMLQQTIKAKYKGKSYRAIVELCKETSQLQEFCRYICSKLECCPNLISTTNYHDSCPENCGLQTK TQFQIKTRGAKLPKYSYDRKTHKKILLAHRSHDDGSHKVKVHRADGTKKHHNTSVVKPELILNSNPLYWSVNDVVSYIKS TECAQLARLLKEQDIDGQALLLLSLPVLQEYLDLKLGPAIKLCHHIEKIKLAFYRQYANLS |
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