Gene
| Gene Model ID | pfu_aug2.0_96.1_20219 |
|---|---|
| Locus | scaffold96.1 : 195708 ... 208173 : + |
| To GenomeBrowser | scaffold96.1:195708..208173 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_554.1_15123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20219.t1 | 2 | 1 | DUF3661 | 92 | 170 | 4.7e-20 | 71.9 | 5.1e-23 | 7.6e-19 | 68.0 |
| pfu_aug2.0_96.1_20219.t1 | 2 | 2 | DUF3661 | 173 | 185 | 4.7e-20 | 71.9 | 0.00045 | 6.6 | 6.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20219.t1 | gi|524873227|ref|XP_005093364.1| | PREDICTED: transmembrane protein 110-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_96.1_20219.t1 | gi|676467842|ref|XP_009058018.1| | hypothetical protein LOTGIDRAFT_182597 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_96.1_20219.t1 | gi|585692202|ref|XP_006821403.1| | PREDICTED: transmembrane protein 110-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_96.1_20219.t1 | gi|260822567|ref|XP_002606673.1| | hypothetical protein BRAFLDRAFT_209428 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_96.1_20219.t1 | gi|156395459|ref|XP_001637128.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20219.t1 atgggagtcctttctgcagacaccagtgatgccaatagaagtgtgggaaccacagaaaaggagcattgtaatccaggaga tctgatggggacacttggactcttcattcaagctctactcgctttccttgcatttacatctttgattgatgaaggagaca ctgaacagaaatctgatcaactaaggttttatgatacctcaaaacaaggttttggtgctgctgtgatccactttgctaac gtcttccttgctgatatgttccagggggatccatgtacatggtacttcattagctttatccttgactccactgtaggaat agtggtcatatatttagggctgaaatttactcagatcctggtcagacattttaactgtctgactttaaaatttggtgaat atgggagtccccctcagtgcagtgcatgggtagggcagtgtgggctgtatatactagtcatgatcatagagaaaatactc atgaccttactggtgcagtttagcttctggaaagatgctttcatattttgggttgttgacaatttcctgaagggaaaatt caaaggaacaaagacaatatatgtgagtgaaaatgacccatctgtaaagtacagtaaaacacgagatgaggtgcgttatt ataaccgtatagagagagctgaagacttagaatcagatcttataggatcgacagatgaagagtttgacctacgacacaga gcagctgtggagggcacacagaaacttctggcctga |
|
Protein
| Protein ID | pfu_aug2.0_96.1_20219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20219.t1 MGVLSADTSDANRSVGTTEKEHCNPGDLMGTLGLFIQALLAFLAFTSLIDEGDTEQKSDQLRFYDTSKQGFGAAVIHFAN VFLADMFQGDPCTWYFISFILDSTVGIVVIYLGLKFTQILVRHFNCLTLKFGEYGSPPQCSAWVGQCGLYILVMIIEKIL MTLLVQFSFWKDAFIFWVVDNFLKGKFKGTKTIYVSENDPSVKYSKTRDEVRYYNRIERAEDLESDLIGSTDEEFDLRHR AAVEGTQKLLA |
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