Gene
| Gene Model ID | pfu_aug2.0_96.1_20221 |
|---|---|
| Locus | scaffold96.1 : 264848 ... 275811 : + |
| To GenomeBrowser | scaffold96.1:264848..275811 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_1516.1_22620 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20221.t1 | 1 | 1 | VIT | 29 | 93 | 9.8e-17 | 60.7 | 1.1e-19 | 2.4e-16 | 59.4 |
| pfu_aug2.0_96.1_20221.t1 | 2 | 1 | VWA | 224 | 313 | 1.4e-12 | 47.6 | 2.9e-15 | 6.1e-12 | 45.6 |
| pfu_aug2.0_96.1_20221.t1 | 1 | 1 | VWA_3 | 224 | 315 | 7.7e-12 | 45.1 | 7.1e-15 | 1.5e-11 | 44.2 |
| pfu_aug2.0_96.1_20221.t1 | 1 | 1 | VWA_2 | 224 | 314 | 1.0e-09 | 38.7 | 1.1e-12 | 2.3e-09 | 37.5 |
| pfu_aug2.0_96.1_20221.t1 | 2 | 2 | VWA | 723 | 756 | 1.4e-12 | 47.6 | 0.73 | 1600.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20221.t1 | gi|591350813|ref|XP_007069859.1| | PREDICTED: LOW QUALITY PROTEIN: inter-alpha-trypsin inhibitor heavy chain H6 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_96.1_20221.t1 | gi|585655155|ref|XP_006815433.1| | PREDICTED: inter-alpha-trypsin inhibitor heavy chain H3-like, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_96.1_20221.t1 | gi|260824341|ref|XP_002607126.1| | hypothetical protein BRAFLDRAFT_118667 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20221.t1 atggaaatgaagatccaagcaataccgtgtgctttattgatattactgtgtttttcgtttgcagaaaagaataataaaag aataataattacaaacaacgaaacgtacgatggggaggtaaaagaaaaaggagaagccaagaaacaatatgaagcagcca aaaacagaggacaaagtgccgggcatattgtagcaaagcctagagagacgaacatgttccaaattatggtcaacattgct gccaaggaaaaggtcgcgtttgagttgacctatcaggaattactgcgccgaaagaagggacgatatagccatgtgatata tatagatccaggacagctggttgatgatttgataatcgagcttgcaattaatgaatcacgtgccttgtctttgctcaaag ttcctgccattcggaacgatatattagcaaatgacaacgtttcagatgttaacgacatagctgtaattgagcgatcatca ccgaagtctgccttgataacatacaagccaactattgaccaacaacgacaagaatcagagaggggcgtcagtggacagtt tgttgtggaatatgatatagaaagagaaaatgtagctggagaattattggtggtcaacggatattttgttcactattttg cccctgataaattacctccccttcctatggatattgtcttcattttggataaaagtggatccatgagcggaaggaagata gtgcaattaaaggaagccatgaagaaaattcttagtgacatgcgcactgatgacagatttactataatgacttttgacgg aataatccgtttttggaagaattcgcttgtctcagcgacgaaacaaactttattggaagccaaagacttcgtggccaaaa tccaagctaggggctcaaccaatatcaacgatgccctcatgcgtggtctacgcttattgtctggattcattgaagagatt tccacagttcttctgaagaatgtaacattcaagtatctcaatgacaaagtcaaccaaacaacactaacaaagacaaatta caacacagtatttggtggcagcgaggtgataatcagtggtagactagcagacaaaacaacgcagggcttaagtacaaatg atctacctctgaaaataacggggaccggtaaagatgagcctttcatttgtgtatatccccttcctcccataaagattgac agagacatcaacgttaccaaagacgtatcaataggcggttatttctctaaaataacggagaaattatgggcctacctaac tgtcaaacagatgttacgtaaacttgatgcacttacggataaagatgagaaacaaaaagtgaatgacaggattctacaat tgtcaataaagtatgatttcgtgactccactgacttcgatggtagtcactatgccggatgagctaaaggctaagccacga ttggtcgaaggttcagcaggaatgccaggaccacccgtacagtttagcatgcacaagccggcacgttggttagcacctgg atcgtttcattcaggtccattcctatctcctgcgacaaggtaccagacaaccacggcaggattgtttacaataacaaaac caataacaattccaacaacaacaatgccaacaacaacaacaatgccaacaacaacaacaatgccaacaacgataactact actactacaatgccaacaactactacaacacagaaacctgccacgactcatcaacaagccagcagttctaagattacgtt cgtcagtatagtcgtgaagattcctggcattatatcacctttatgtatgaacttgccaccaggaaagttcattttattcc aaacaaccaagggagatgagaaaattatcgtacacgctggacctacgaaagacggtgtaactccagtggtacgagtcatc catacaaaaccaggagcaataagagaggaagtgttcccaaaaccaaggttgggcaatgcaacaactcttatgcagatccg caataacaacataaatacggaagttatacagatcgtggaaaactcatacagcaggctccagctatacattaaactaccat cctccaccccggatgatatagatggcattctgagagtcttcaaaggaatgaccggacggagagaacttcagggtaaaaca aaaaatgggaacctgatggcaaaactacaacttaggaaaaaaggatccgtggatatagaagtgagtgctattggagctag aatggaagttttcactccaatgtgctggattgtgaacaacaatctaatgaaaaatttgaatttattgaaataccagttat aa |
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Protein
| Protein ID | pfu_aug2.0_96.1_20221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20221.t1 MEMKIQAIPCALLILLCFSFAEKNNKRIIITNNETYDGEVKEKGEAKKQYEAAKNRGQSAGHIVAKPRETNMFQIMVNIA AKEKVAFELTYQELLRRKKGRYSHVIYIDPGQLVDDLIIELAINESRALSLLKVPAIRNDILANDNVSDVNDIAVIERSS PKSALITYKPTIDQQRQESERGVSGQFVVEYDIERENVAGELLVVNGYFVHYFAPDKLPPLPMDIVFILDKSGSMSGRKI VQLKEAMKKILSDMRTDDRFTIMTFDGIIRFWKNSLVSATKQTLLEAKDFVAKIQARGSTNINDALMRGLRLLSGFIEEI STVLLKNVTFKYLNDKVNQTTLTKTNYNTVFGGSEVIISGRLADKTTQGLSTNDLPLKITGTGKDEPFICVYPLPPIKID RDINVTKDVSIGGYFSKITEKLWAYLTVKQMLRKLDALTDKDEKQKVNDRILQLSIKYDFVTPLTSMVVTMPDELKAKPR LVEGSAGMPGPPVQFSMHKPARWLAPGSFHSGPFLSPATRYQTTTAGLFTITKPITIPTTTMPTTTTMPTTTTMPTTITT TTTMPTTTTTQKPATTHQQASSSKITFVSIVVKIPGIISPLCMNLPPGKFILFQTTKGDEKIIVHAGPTKDGVTPVVRVI HTKPGAIREEVFPKPRLGNATTLMQIRNNNINTEVIQIVENSYSRLQLYIKLPSSTPDDIDGILRVFKGMTGRRELQGKT KNGNLMAKLQLRKKGSVDIEVSAIGARMEVFTPMCWIVNNNLMKNLNLLKYQL |
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