Gene
| Gene Model ID | pfu_aug2.0_96.1_20223 |
|---|---|
| Locus | scaffold96.1 : 297472 ... 321017 : - |
| To GenomeBrowser | scaffold96.1:297472..321017 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_1516.1_22624 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20223.t1 | 2 | 1 | Avl9 | 39 | 172 | 3.4e-06 | 25.7 | 2.1e-09 | 7.8e-06 | 24.6 |
| pfu_aug2.0_96.1_20223.t1 | 1 | 1 | DENN | 141 | 332 | 8.5e-07 | 28.8 | 2.4e-09 | 8.8e-06 | 25.5 |
| pfu_aug2.0_96.1_20223.t1 | 1 | 1 | SPA | 244 | 349 | 5.1e-15 | 55.1 | 2.3e-18 | 8.7e-15 | 54.4 |
| pfu_aug2.0_96.1_20223.t1 | 2 | 2 | Avl9 | 323 | 387 | 3.4e-06 | 25.7 | 0.63 | 2300.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20223.t1 | gi|524911992|ref|XP_005110851.1| | PREDICTED: protein DENND6B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_96.1_20223.t1 | gi|676489476|ref|XP_009064947.1| | hypothetical protein LOTGIDRAFT_132429 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_96.1_20223.t1 | gi|585719049|ref|XP_006825990.1| | PREDICTED: protein DENND6A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_96.1_20223.t1 | gi|390334102|ref|XP_003723848.1| | PREDICTED: protein DENND6A [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_96.1_20223.t1 | gi|390334100|ref|XP_783119.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20223.t1 atggcagggatggaggagggcacagagagatctgtgctttcaacagctttagacgacctaccccttgccacaacagtttt gccgtgggatagattctcaaactggttatattgtgcgtgtgtcgtaacttttgatttagagctgggtcaagccatggagc tcatctacccaggtcatgttaagcttacagatgttgagaaaacaaatatctgctacttgtctttcccagactctaattca ggttgtatgggagatacccagtttcacttcagaattcgtcagagtccgggaaggaaatcattcagcaaacaatcacaaca tcaaagagaatatcctctgtctttacagacagagaatgggtatttgtttggttttgtctattttcggcaaactaaagata gagcaatcagacgaggatattttcagaagtcagtggtcctgatttccaagttgccatttgttgccttattctctcagctg gtcggcattatagcaccagagtactttgacaatggagaaccgagtcttgaagcagcttgccatgacattgaccagtggcc tagtcctgttgccggggaaacggtcaacctgcccatatttggtactgttctacaggtacgagtgccttcaaggtcggata aggttgtagatcgagttcagcaaagtaatataccaaattctcccctcttacctgcccattctgtactgccttcattatat gaagtggacatttttagtgctttccagagtatcctacctcatatacagatgttatgggaactagtcctcattggagagcc ccttgttgtcatggcagcctctcccactgtcacttcctccactgtacaagcattaactagtcttatagctccacagaaat attgttcagattatcggccttacttcaccatacatgacagcgaatttaaagaatacacaacgagaactcaagctccacct gcagtgatattaggggttacaaaccctttctttgccaaaacgttacagcactggcctcatataatcaggattggtgaaat gtccactcatgcacctaaaggcttcaacaaactgaagaaagcttctagtctcaaaacactggactctaaaccagcacaac atattgtatttaaaggtatgcagagtaagcgtccagtagaagcacagaatgccatactaaggagatacttcttggaactc tcacagagctttatgattcctctggagaggtacatgggaagtttgatgcccttacaaagaaacatttctccacataagaa tcctccaaagctgcgaccttttgaccctgatgaatttcttaaatcagtagagcattctggacctcagctgacatcaggca ttaaaggagattgggaggggctgtatagaaagtattttaaaagtcaaaattttgagggatggtatcaacatcgacagttt gaggtgaatcagaagttacaagtattacacatggaagcattatgtgaagctaatttgacacagtggatagaagataaagg ggaggtggagattgttgacttaatcatcagaatcaaagataaactatcctttgctaccaacaacaacattgccattaaca gtagcagtatagggaagttacggaaacatttagactctattatgtgttcactgccagaagatctacagtctgtgctcaaa agctga |
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Protein
| Protein ID | pfu_aug2.0_96.1_20223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20223.t1 MAGMEEGTERSVLSTALDDLPLATTVLPWDRFSNWLYCACVVTFDLELGQAMELIYPGHVKLTDVEKTNICYLSFPDSNS GCMGDTQFHFRIRQSPGRKSFSKQSQHQREYPLSLQTENGYLFGFVYFRQTKDRAIRRGYFQKSVVLISKLPFVALFSQL VGIIAPEYFDNGEPSLEAACHDIDQWPSPVAGETVNLPIFGTVLQVRVPSRSDKVVDRVQQSNIPNSPLLPAHSVLPSLY EVDIFSAFQSILPHIQMLWELVLIGEPLVVMAASPTVTSSTVQALTSLIAPQKYCSDYRPYFTIHDSEFKEYTTRTQAPP AVILGVTNPFFAKTLQHWPHIIRIGEMSTHAPKGFNKLKKASSLKTLDSKPAQHIVFKGMQSKRPVEAQNAILRRYFLEL SQSFMIPLERYMGSLMPLQRNISPHKNPPKLRPFDPDEFLKSVEHSGPQLTSGIKGDWEGLYRKYFKSQNFEGWYQHRQF EVNQKLQVLHMEALCEANLTQWIEDKGEVEIVDLIIRIKDKLSFATNNNIAINSSSIGKLRKHLDSIMCSLPEDLQSVLK S |
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