Gene
| Gene Model ID | pfu_aug2.0_96.1_20228 |
|---|---|
| Locus | scaffold96.1 : 464728 ... 474800 : + |
| To GenomeBrowser | scaffold96.1:464728..474800 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | pfu_aug1.0_823.1_07710 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynein beta ciliary-like | GO:0003777 GO:0005524 GO:0007018 GO:0008152 GO:0016887 GO:0030286 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20228.t1 | 1 | 1 | MT | 17 | 210 | 0.0 | 330.9 | 0.0 | 0.0 | 329.9 |
| pfu_aug2.0_96.1_20228.t1 | 1 | 1 | AAA_9 | 228 | 455 | 0.0 | 449.5 | 0.0 | 0.0 | 448.1 |
| pfu_aug2.0_96.1_20228.t1 | 1 | 1 | Dynein_heavy | 586 | 1283 | 0.0 | 1011.6 | 0.0 | 0.0 | 1011.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20228.t1 | gi|390349049|ref|XP_786200.3| | 0.0 | |
| pfu_aug2.0_96.1_20228.t1 | gi|390367748|ref|XP_797783.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20228.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20228.t1 atgtgtcagtgctccgattgtgcggaggaatatctcgagcaggtgtatgacattgaccagtttttggacaacttggtaaa ctatgacaaggataacatccatgacaactgtctgaaagctgtagacccataccttaaggatccagaattccaacctgaat tcatccaagccaagtcctttgctgctgctggtttatgctcctgggttatcaacattgtcatctactaccgtgtatattgt gaggttgaacccaagagaatggccttggctcaagccaatgctgagctggctgctgctagagaaaaactgaaagtcatcac aaacaaaatccagagtctggaagctgatcttgccaaactgacagcagagtttgagaaagccactgctgagaaactcagat gtcaacaagaagctgagcttactgctaaaacaatagagctagctaacaggcttgttggaggcttggcttcagaaaatgtc agatgggctcagtccattgatgagtacagagagcaggagaaaactctgcctggtgatatcctcatgatcacagcatttgt atcttacgtgggttgctttaccaagcagtacagattggatttaatggacaatcattgggtaccatatatgggtactttga agaaccctgtgccaatctcggagggtctggacccacttactctgctaactgatgatgcacagattgctacatggaacaat gaaggactacctagtgacaggatgtctacagaaaatgccaccattctcagtaactgtgagagatggccactgatgattga tcctcaacttcagggtctgaagtggatcaaaaccaaatacggagcagacttgaagatcatccgtctgggacagaagggtt atcttgatgccatggagagagctctgtcatctggtgacacagtgctgatggagaacattggtgagactgttgatcctgta ttagatccaattataggtcgtaatactatcaagaagggtagagctatcaagattggtgacaaggaggtagaatatcaccc agacttcaagctgatcatgcagactaagttagccaatccccactaccagcctgagatgcaggctcagaccacactgatta acttcactgtaactcgtgacggtctggaggatcagttactggccgctgtggtcagcaaggaaagaccggatctggagaag ctgaaggctgacctaacacgtcaacagaaccagtttaagattacactgaaggagcttgaggattctctgttagcccgtct gtccgctgccgagggtaacttccttggtgactacgctctggtagagaatctggagacaacaaagaggactgctgctgaga tcgaggtgaaggctgaggaagccaagaagacagaggtagagatcaacacagccagagagtcttaccgaccagccgctgct agggcttctctactttacttcatcctcaacgatctcttcaagatccatcctatgtaccagttctcactcaaggcttacaa tgtggtgtttgagaaagctattgagagagctgaaccagcagaggaggtgaaacaaagagttgccaatctgattgactgta taacatactctgtgtttatgtacacagctagaggattgtttgagagggacaagattatcttcacttcccagatgacattc cagattttgtcggcagccaatgacattaaccctgtagagttggacttcctgttacgtttcccagtggttcctaatgttac cagccctgttgacttcctaaacaacttcagctggggaggtattaaggctttggcaaactttgaggagttcagaaaccttg acagagacatagaaggatctgctaaacgatggaagaagtttgtggagagtgagtgtccagagaaagaaaagttcccacag gaatggaagaataaaacatctttacagaagctgtgtatgatgagagcactcagacccgacagaatgacatacgctgtcac taactttgtagaggagaagcttggtaccaagtatgtagagggcagagctatggaatttgccaaatcatttgaggaatctg gacctgcaactccaatattcttcatcctgtcaccaggagtggatccactgaaggatgtagaggctttaggaaagaaacta ggctttagtgaggatcaacgtaacttccataacatttccctaggtcaaggtcaggaaatcgttgctgaacaggctatgga tttgtctgcaaaggaaggacactggaatgttcacttggtggcaaaatggttaccaaaactagagaagaagctagaggagt acagccaggagagcaatgagaattaccgagtgtttatctcagctgagccagcctcctcagccgacagccatatcatacca caaggtatcctagaaacagccattaaaatcacaaacgagccaccgactggcatgtttgcgaatctacacaaagccctgga caatttcaatcaggacaccatggaaatgtgtgccagagagactgagtttaagagtatcttattcgccctctgttacttcc atgctgtggtatcagagaggagaaagtttggtcctcagggttggaacagagtatacccatacaacactggtgatctgacc atcagtgccatggtgttgtataactacctagaggctaacgctaaggtaccatgggaagatctgaggtatctgtttggaga gattatgtacggtggtcacatcaccgacgactgggacagacgtctctgcagaacatacctggaggtgtacatgcacccag acatgcttgatggtgagctatacttggctcctggattccccatcccaccaaactctgactacaaaggttaccataactac attgacgaatgtctacccccagagagcccctacctgtatggcctacatcctaactctgagattgaattcttaaccactat ctcagagaatctgtttaagaccgtgtttgagatgcagccccgtgatgctggagcaggaggtggtgcctctgtcagtagag aggagaagctcaagtctatccttgatgagattgtagagaagttaccagacgagtttaacatgctggagattatggccaag gtaccgcctgaggagagaactccatacgtattagtggcattccaggaatgtgagcgtatgaacatgcttactaacgaaat caaacgctctctgaaggaacttgatctgggtctgaagggtgagttgacaatcacagctgatatggaggaccttggtaatt gtctgtttttggacacagtaccaggtagctgggcaaagcgagcttatccatctctgtatggtttaaccacatggtatgct gatctcctacagcgtatcaaggagctggaaacttggtcatctgacttccagttgccagcagccgtatggttgggaggatt cttcaacccacagtccttccttaccgccattatgcagcagatggcccgtaagaacgaatggcctctggatcgtatgtgtc tacagtgtgatgtcaccaagaagagccgagaggacatggcgggaccgcccagagaaggagcgtacgtacatggcttattc atggagggagctcgatgggacatgcagacaggtttgatcagtgaggcacgactgaaggaactggctccagccatgcctgt aattttcatcagggccatccctgtggacagacaagacaccaggaatgtgtacgagtgtccagtgtacaagaccaagacca gaggacctacctttgtctggaccttcaatctcaagtccaaggagaaggccagcaaatggatcctgggtggagttgcccta cttttacaagtataa |
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Protein
| Protein ID | pfu_aug2.0_96.1_20228.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20228.t1 MCQCSDCAEEYLEQVYDIDQFLDNLVNYDKDNIHDNCLKAVDPYLKDPEFQPEFIQAKSFAAAGLCSWVINIVIYYRVYC EVEPKRMALAQANAELAAAREKLKVITNKIQSLEADLAKLTAEFEKATAEKLRCQQEAELTAKTIELANRLVGGLASENV RWAQSIDEYREQEKTLPGDILMITAFVSYVGCFTKQYRLDLMDNHWVPYMGTLKNPVPISEGLDPLTLLTDDAQIATWNN EGLPSDRMSTENATILSNCERWPLMIDPQLQGLKWIKTKYGADLKIIRLGQKGYLDAMERALSSGDTVLMENIGETVDPV LDPIIGRNTIKKGRAIKIGDKEVEYHPDFKLIMQTKLANPHYQPEMQAQTTLINFTVTRDGLEDQLLAAVVSKERPDLEK LKADLTRQQNQFKITLKELEDSLLARLSAAEGNFLGDYALVENLETTKRTAAEIEVKAEEAKKTEVEINTARESYRPAAA RASLLYFILNDLFKIHPMYQFSLKAYNVVFEKAIERAEPAEEVKQRVANLIDCITYSVFMYTARGLFERDKIIFTSQMTF QILSAANDINPVELDFLLRFPVVPNVTSPVDFLNNFSWGGIKALANFEEFRNLDRDIEGSAKRWKKFVESECPEKEKFPQ EWKNKTSLQKLCMMRALRPDRMTYAVTNFVEEKLGTKYVEGRAMEFAKSFEESGPATPIFFILSPGVDPLKDVEALGKKL GFSEDQRNFHNISLGQGQEIVAEQAMDLSAKEGHWNVHLVAKWLPKLEKKLEEYSQESNENYRVFISAEPASSADSHIIP QGILETAIKITNEPPTGMFANLHKALDNFNQDTMEMCARETEFKSILFALCYFHAVVSERRKFGPQGWNRVYPYNTGDLT ISAMVLYNYLEANAKVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEVYMHPDMLDGELYLAPGFPIPPNSDYKGYHNY IDECLPPESPYLYGLHPNSEIEFLTTISENLFKTVFEMQPRDAGAGGGASVSREEKLKSILDEIVEKLPDEFNMLEIMAK VPPEERTPYVLVAFQECERMNMLTNEIKRSLKELDLGLKGELTITADMEDLGNCLFLDTVPGSWAKRAYPSLYGLTTWYA DLLQRIKELETWSSDFQLPAAVWLGGFFNPQSFLTAIMQQMARKNEWPLDRMCLQCDVTKKSREDMAGPPREGAYVHGLF MEGARWDMQTGLISEARLKELAPAMPVIFIRAIPVDRQDTRNVYECPVYKTKTRGPTFVWTFNLKSKEKASKWILGGVAL LLQV |
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