Gene
| Gene Model ID | pfu_aug2.0_96.1_20229 |
|---|---|
| Locus | scaffold96.1 : 478252 ... 484293 : + |
| To GenomeBrowser | scaffold96.1:478252..484293 |
| Genes list of scaffold | scaffold96.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_96.1_20229.t1 | 3 | 1 | zf-C2H2_4 | 67 | 91 | 4.2e-07 | 29.8 | 1.3e-05 | 0.04 | 14.2 |
| pfu_aug2.0_96.1_20229.t1 | 3 | 1 | zf-C2H2 | 68 | 91 | 1.9e-06 | 27.8 | 7.8e-05 | 0.23 | 11.8 |
| pfu_aug2.0_96.1_20229.t1 | 3 | 2 | zf-C2H2_4 | 94 | 116 | 4.2e-07 | 29.8 | 0.00014 | 0.43 | 11.0 |
| pfu_aug2.0_96.1_20229.t1 | 3 | 2 | zf-C2H2 | 94 | 116 | 1.9e-06 | 27.8 | 4.0e-06 | 0.012 | 15.9 |
| pfu_aug2.0_96.1_20229.t1 | 3 | 3 | zf-C2H2_4 | 130 | 155 | 4.2e-07 | 29.8 | 5.1e-05 | 0.15 | 12.4 |
| pfu_aug2.0_96.1_20229.t1 | 3 | 3 | zf-C2H2 | 130 | 155 | 1.9e-06 | 27.8 | 0.00093 | 2.7 | 8.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_96.1_20229.t1 | gi|632937040|ref|XP_007897104.1| | PREDICTED: zinc finger protein 511 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_96.1_20229.t1 | gi|602733371|ref|XP_007452071.1| | PREDICTED: zinc finger protein 511 [Lipotes vexillifer] | 9.94922e-44 |
| pfu_aug2.0_96.1_20229.t1 | gi|224052215|ref|XP_002186693.1| | 3.9937e-43 | |
| pfu_aug2.0_96.1_20229.t1 | gi|291243229|ref|XP_002741505.1| | PREDICTED: zinc finger protein 511-like [Saccoglossus kowalevskii] | 5.00264e-43 |
| pfu_aug2.0_96.1_20229.t1 | gi|194041703|ref|XP_001926428.1| | PREDICTED: zinc finger protein 511 isoformX1 [Sus scrofa] | 8.00141e-43 |
Transcript
| Transcript ID | pfu_aug2.0_96.1_20229.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20229.t1 atgtcggaagattcatcttcgcttataactgtttgtggacaatggaaacataggaaaagacggtttgacaatgatgctga tttgtttgaggaaggaaatattatgtgttgcatagcaactaaattaattccagtagaggataaacaagaattaatggagt cagcgacacagagtcctttaaatgacatcaaggatagctgctgtggtatttctggatgcaacaagagatttgattcactc agcagttatgaagttcactacaacagttgccatagaaacaaatgtaatgaatgtaaaagaaatttcccctccagtcatct gctagacatacacatacaagaatggcatgatgctatgtttgagctgatggcagcaaaacaaccaatgtttcagtgcctcc tggaatcctgtaatgacagattttctgattctgaagcgaggaggagtcacatgatcatgacacatcgttatcccagtaac ttcagattctatcagaagaagcccagtaaaacaaacaacaacaaggagaacatagacaactctatggagacagatacatg tactagctcagggaaaccccagtcttcaggaagggtattcagttataaggtaccccagcatatcagctttggtcatggtg tatctcgaggtttccagcggggtaggggaggtcgaggaggaaggggtcgacgtagcagaggtaaacattggcaccagagg gatcagagtgaaaaaactaccgttaatatagaatctgtggatatgtcagacttaactaatgcactggaatag |
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Protein
| Protein ID | pfu_aug2.0_96.1_20229.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_96.1_20229.t1 MSEDSSSLITVCGQWKHRKRRFDNDADLFEEGNIMCCIATKLIPVEDKQELMESATQSPLNDIKDSCCGISGCNKRFDSL SSYEVHYNSCHRNKCNECKRNFPSSHLLDIHIQEWHDAMFELMAAKQPMFQCLLESCNDRFSDSEARRSHMIMTHRYPSN FRFYQKKPSKTNNNKENIDNSMETDTCTSSGKPQSSGRVFSYKVPQHISFGHGVSRGFQRGRGGRGGRGRRSRGKHWHQR DQSEKTTVNIESVDMSDLTNALE |
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