Gene
| Gene Model ID | pfu_aug2.0_960.1_01272 |
|---|---|
| Locus | scaffold960.1 : 61238 ... 74185 : - |
| To GenomeBrowser | scaffold960.1:61238..74185 |
| Genes list of scaffold | scaffold960.1 |
| Synonym | pfu_aug1.0_11346.1_68323 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_960.1_01272.t1 | 2 | 1 | Tetraspannin | 36 | 115 | 5.3e-24 | 84.7 | 3.2e-13 | 1.6e-09 | 37.3 |
| pfu_aug2.0_960.1_01272.t1 | 2 | 2 | Tetraspannin | 136 | 274 | 5.3e-24 | 84.7 | 6.9e-18 | 3.4e-14 | 52.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_960.1_01272.t1 | gi|676438777|ref|XP_009048641.1| | hypothetical protein LOTGIDRAFT_157798 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_960.1_01272.t1 | gi|524890249|ref|XP_005101672.1| | PREDICTED: CD151 antigen-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_960.1_01272.t1 | gi|676438943|ref|XP_009048696.1| | hypothetical protein LOTGIDRAFT_157853 [Lottia gigantea] | 2.0e-38 |
| pfu_aug2.0_960.1_01272.t1 | gi|676438940|ref|XP_009048695.1| | hypothetical protein LOTGIDRAFT_157852 [Lottia gigantea] | 5.0e-36 |
| pfu_aug2.0_960.1_01272.t1 | gi|676442800|ref|XP_009049918.1| | hypothetical protein LOTGIDRAFT_231077 [Lottia gigantea] | 3.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_960.1_01272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_960.1_01272.t1 atgcaggaaaagccacggagagaaaactcagacatgtctttcacacaatcagaagatgatctgggaatattgaaggaaac caaaaagctccacttcaaacacttgctgaaatatgctctattgtttatgcaatttgctgttctggttgcatctgtgacaa catttgcgataggaatctacacccatgaggtgaagtatggtagtaaagtggtgtcgggtttgattggagcagacatgtac caggtggactcgataatgatgatatctgctggagcttccgccatcctcgtcactataatgggaatgattggtgtactcag aaggaacaagtgcttactgggactgcttgagagtactgctaagaaagctatgctggattctataacagagagctatggtg tcgttaaaaatggccgaggaagtaacgtcaaaattaccaaaaactgggatagtattcaaagaaattttcagtgctgtgga gttcatgggtcagcaaacagtacaacgtcctgggcagtgtataagctcaacagcttctgggtaaaggaccaattgtctaa tcacagcctggtaccagagagttgctgttcaccactgagtgatatggacctatgtactgggaaaatagcaactaacggac caccacacgaaggaccccctgtcttattaaatagaatggtcaactacactctatatacaacgggttgctatgataaatta gagggttacctggaacgcaatggaatccttctgggaacagcagctatcgtcacagcagtttttatggtgataatgatggt tctgggataccttcgatacagatcgatcaactgtttctag |
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Protein
| Protein ID | pfu_aug2.0_960.1_01272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_960.1_01272.t1 MQEKPRRENSDMSFTQSEDDLGILKETKKLHFKHLLKYALLFMQFAVLVASVTTFAIGIYTHEVKYGSKVVSGLIGADMY QVDSIMMISAGASAILVTIMGMIGVLRRNKCLLGLLESTAKKAMLDSITESYGVVKNGRGSNVKITKNWDSIQRNFQCCG VHGSANSTTSWAVYKLNSFWVKDQLSNHSLVPESCCSPLSDMDLCTGKIATNGPPHEGPPVLLNRMVNYTLYTTGCYDKL EGYLERNGILLGTAAIVTAVFMVIMMVLGYLRYRSINCF |
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