Gene
| Gene Model ID | pfu_aug2.0_964.1_14686 |
|---|---|
| Locus | scaffold964.1 : 716 ... 12460 : + |
| To GenomeBrowser | scaffold964.1:716..12460 |
| Genes list of scaffold | scaffold964.1 |
| Synonym | pfu_aug1.0_2042.1_15689 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_964.1_14686.t1 | 2 | 1 | WD40 | 161 | 185 | 7.1e-08 | 32.0 | 0.0013 | 19.0 | 5.3 |
| pfu_aug2.0_964.1_14686.t1 | 2 | 2 | WD40 | 212 | 243 | 7.1e-08 | 32.0 | 2.0e-09 | 2.9e-05 | 23.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_964.1_14686.t1 | gi|524864203|ref|XP_005088939.1| | PREDICTED: WD repeat-containing protein 54-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_964.1_14686.t1 | gi|676446182|ref|XP_009050996.1| | hypothetical protein LOTGIDRAFT_203718 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_964.1_14686.t1 | gi|147900490|ref|NP_001090336.1| | D3Mm3e protein [Xenopus laevis] | 0.0 |
| pfu_aug2.0_964.1_14686.t1 | gi|736210131|ref|XP_010776957.1| | PREDICTED: WD repeat-containing protein 54 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_964.1_14686.t1 | gi|551504048|ref|XP_005803561.1| | PREDICTED: WD repeat-containing protein 54-like [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_964.1_14686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_964.1_14686.t1 atgtacaggaaggagaaacccttgactttgaagagcagtgcatcttcacttcctaataatctctcagttttagtgacatc ggataaatcgtcgttgaattatgccgttgtacacaaggcggtggttaatattatttcgtctactacagacggttctacgg tcacaaacagacaaattatttgtaaagaaccgtcagcaacacaacaaactacaccaatggtcatacaggccaaatggata acacttcctgtaagaactatcatggtcctcacttcattaaaaggcattcagatgtttgaatcagatgggtctgcgatgat ttactggcacgctcttggggatgtcaacagtacagatgttctagaacatgccaactttggtcgaggtataacagggattg gagagagttttgttgtagttggaacccagctgggagaactccaggtgttcaacatacctctgaaaggaacaaatataaca gtcaaagaaagtctaatcggacataaatacccgatatgtgacctagccagtgatggggacacaatgattagctgtgatga acaggctaccgggaatggcgttggtcagatcaagttatactgtgctaaaacaggaaaactaacagctcaggcaaatgccc acgctcgctgggtaatggctttagacatagctaaagataacggaatgttactgtcagcatcagaagattcctttgtgagg ttatggaagctgaagccaggatcatcaccagagatcgagcacctgcacacagagaacgtaacagatcagcaggtagtcgg agctcagttcatacatcagggtggacgtgcgttctgcgttacaggttacgacagctgtgatctgtcattctttgtacaaa catga |
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Protein
| Protein ID | pfu_aug2.0_964.1_14686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_964.1_14686.t1 MYRKEKPLTLKSSASSLPNNLSVLVTSDKSSLNYAVVHKAVVNIISSTTDGSTVTNRQIICKEPSATQQTTPMVIQAKWI TLPVRTIMVLTSLKGIQMFESDGSAMIYWHALGDVNSTDVLEHANFGRGITGIGESFVVVGTQLGELQVFNIPLKGTNIT VKESLIGHKYPICDLASDGDTMISCDEQATGNGVGQIKLYCAKTGKLTAQANAHARWVMALDIAKDNGMLLSASEDSFVR LWKLKPGSSPEIEHLHTENVTDQQVVGAQFIHQGGRAFCVTGYDSCDLSFFVQT |
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