Gene
| Gene Model ID | pfu_aug2.0_964.1_14692 |
|---|---|
| Locus | scaffold964.1 : 190016 ... 209550 : - |
| To GenomeBrowser | scaffold964.1:190016..209550 |
| Genes list of scaffold | scaffold964.1 |
| Synonym | pfu_aug1.0_322.1_14977 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_964.1_14692.t1 | 1 | 1 | Tudor-knot | 129 | 173 | 1.2e-07 | 31.3 | 8.1e-11 | 4.0e-07 | 29.6 |
| pfu_aug2.0_964.1_14692.t1 | 1 | 1 | PHD | 734 | 778 | 3.0e-07 | 30.0 | 1.5e-10 | 7.5e-07 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_964.1_14692.t1 | gi|156372819|ref|XP_001629233.1| | predicted protein [Nematostella vectensis] | 3.99931e-42 |
| pfu_aug2.0_964.1_14692.t1 | gi|719745508|ref|XP_010211110.1| | PREDICTED: PHD finger protein 20 [Tinamus guttatus] | 1.0e-34 |
| pfu_aug2.0_964.1_14692.t1 | gi|395505364|ref|XP_003757012.1| | 7.0e-34 | |
| pfu_aug2.0_964.1_14692.t1 | gi|665805575|ref|XP_008550987.1| | PREDICTED: PHD finger protein 20 [Microplitis demolitor] | 4.0e-33 |
| pfu_aug2.0_964.1_14692.t1 | gi|340730117|ref|XP_003403333.1| | 4.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_964.1_14692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_964.1_14692.t1 gagaaggaatctggtgcgtgtgcgtgcatggtgagagttttctggtactgtggtagtgtgactgtgaatttaatgagaga aggaaaaattcttggtgaggagaatgagtctttgctgcagagtagcccacctcctggatccattcccagtgtgtccctcc agaccacacccgaggatcctgatcccccagggtcagagggaggcagtagcagagggagttcagagagaggcactcctgta aagtaccgacgtggttcacggttgagtgattccttccaggacaatgctagtacatgctctagtacatcatccgttggtgg gtctgctagtaaaacgatgaataattccaagtttccagtacgacctggcatctcatggaaaaaaggggagagggtagaag ctatggacttcatgaataagtggtatcctgctaagatagtggacattgaagaggatgagcaatcagtgatgatccacttt gatggctggaactctagatatgacgaatgggtgccgatgaccagtgagaagctacgtccacgtgtcagatactcatcacg taaagacaaaccaagacacggggtatgtcatcataacatgggggtatgtcatcaaaacagggggatatgtcatcaaaaca gggggtatgtcgtcaaaacagggggtgtgtgtgatcaaaacatggggtatgtcatcaaaacagagggagcgtatgaggtt ctattttatgatggatttaagaaggttgtccaggggatcaacatcaaaccgatgccatctgaagtaaggaaccagaaaat agaaatagttcatgtgctgccgaaagacgagaagaaaagatctggcgaaacggaagtgacggggaaaaggcgcagttctt cagtttattcaaggagaagtgtggatgaagcagaaggtggtgacagagaaatggttgaaactgtagaaaaagttaaagct gtgcaaaaacggaaaagctctggctcaagggaacgtaaaaagaaagatagcagtaaatcggccactatgtctagagtgcc cagcactgagacattaatcgccaatgtaaccgaatctagaggagatgaagagatggttgagggtgttatgtctccttctg gtaccgaccctgcctatgcagatcctggagtgaaacaaacactcagttatgaggaggatgagggagctgtgtctggctgt atacaggccgatttgcaggaagaaaaacaggaagtggcggaggagtccaaggaaatcatggagtctccttcagagcagat gactgatgctaacgcaatctctgtgaagacagacctgtctaccaccatacctgcctccccagctagcacgctgtctgcag ctactacacctcccctgacaccaaaactatctcccgtacagagagtggagagtaacacacaaatatcgtcaaatattccc gctaccgttattcctgcgttaactgacagagacagaagcacaccagttagtagacctcacaaaaaagctaagaaggaggt gatatcaccgtctatatctgaatccagtgtcggttcacatacagaatctgctgaggccctcaacaggaagagaagcaagt cttcatttgagaaaagttacccatctgctttgtcatctgatctagccttgagcagaaagaggagtaggtctgccactaca gagcgcagtaagggtatcggtaattatattttggtaccggagacagaaccgcctcccaaggcctttgttgtggagcagga acacaatcattataaatgtacatttgaaggatgtaataaagggtttaggaaggagagtcttctagattatcatctcaaat actaccattctaatgatgggaaacctgtacagatacctccccccagaaaacgtaggaaaacatccagtatatgttctaca gattctgatgttcctatttctgccaaacaaagatctcgttctctgagtggaaaccaaagtaaacagcggcacgtatcaac agagagcgcctccagtacggttgaggtccctccacctattgttgagcctcctccatctgtatctgccattcaagtcacag atgaacatttggatgaggagtcaaatcgtcagaggaccatcagtcaaaataccatggtaacggaagacgtcatggaaacg gacgcagaggacaccctcagtaaagacgaagtagtcaactgtatatgtggtttttatgaagagaatggacttatgataca gtgtgacgtgtgtctgtgttggcaacatgctgcgtgttttgagataacagaagccacactgccaaagaaatatgtgtgtt atgtctgtgacaatccaccaggtgtgagggacagctttaagtttatccatgagcaggactggctgaggaatggtcagatg gctcactttaaattcttacacaatcaggaggtagacgagagtagatgccgaactgtacaggccacacacggactcgtctc ggatgtcatcaatatgggggccgtccttcaaagcctcaaacagaaatataaaatagcaagggataaggacaaaactaacc ctgagttgaggaattggatccagaatttggatttagtcgagccagattcagacgatgatgagactgatgatgattcggct acggaggaggatataagatctcgacatgaagaagatatggagacagaaacagaactatcagtgaccgataataacacgtc ggggattgagaatgagtctattgagaaactgtcatctttaaccgagtcgaaggattcaggagagactgaaggttctacag cagaggaaaaagatacgacagcagagaaaactgcagaagactcaaattctcaaagtaatatttctcatactgaggaattg aatgagaaaaattcaaatttagtcaacaattctgaatctgtacaggattctgagtctgtaaacaatatatcttcagcagg tgcttgtccgagtaatgattctagtgagcaaaaaacagaggaaagttctgtgacgataaatgacagtattgaggaaaata aaaaagaggacatttccttacgagatgacgataattctgacactctgagtgcagactctatacggtatgagagtgaaaca ggcggggacgattcacaaggaccttatagtgttattggtccatctggtgatggacagcagggggaggggctaggtagaca ggggaggggcacagacaatgtttcagtggtcatagaaaacccgtttcaacactgtgaaagaaaccttctggaacatattc tcaggatacagaatgagctggaaaagagaatggacatgattgaagaacaagtctcagcgttagaggcagcagattctacg ttccaagctcccaatcagtctcataatatcctaagtgacgtaccacaactcaagagaagtctatacatgcttcagaatga cctagagaaggtcaaactgatgagcacataccatcggtga |
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Protein
| Protein ID | pfu_aug2.0_964.1_14692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_964.1_14692.t1 EKESGACACMVRVFWYCGSVTVNLMREGKILGEENESLLQSSPPPGSIPSVSLQTTPEDPDPPGSEGGSSRGSSERGTPV KYRRGSRLSDSFQDNASTCSSTSSVGGSASKTMNNSKFPVRPGISWKKGERVEAMDFMNKWYPAKIVDIEEDEQSVMIHF DGWNSRYDEWVPMTSEKLRPRVRYSSRKDKPRHGVCHHNMGVCHQNRGICHQNRGYVVKTGGVCDQNMGYVIKTEGAYEV LFYDGFKKVVQGINIKPMPSEVRNQKIEIVHVLPKDEKKRSGETEVTGKRRSSSVYSRRSVDEAEGGDREMVETVEKVKA VQKRKSSGSRERKKKDSSKSATMSRVPSTETLIANVTESRGDEEMVEGVMSPSGTDPAYADPGVKQTLSYEEDEGAVSGC IQADLQEEKQEVAEESKEIMESPSEQMTDANAISVKTDLSTTIPASPASTLSAATTPPLTPKLSPVQRVESNTQISSNIP ATVIPALTDRDRSTPVSRPHKKAKKEVISPSISESSVGSHTESAEALNRKRSKSSFEKSYPSALSSDLALSRKRSRSATT ERSKGIGNYILVPETEPPPKAFVVEQEHNHYKCTFEGCNKGFRKESLLDYHLKYYHSNDGKPVQIPPPRKRRKTSSICST DSDVPISAKQRSRSLSGNQSKQRHVSTESASSTVEVPPPIVEPPPSVSAIQVTDEHLDEESNRQRTISQNTMVTEDVMET DAEDTLSKDEVVNCICGFYEENGLMIQCDVCLCWQHAACFEITEATLPKKYVCYVCDNPPGVRDSFKFIHEQDWLRNGQM AHFKFLHNQEVDESRCRTVQATHGLVSDVINMGAVLQSLKQKYKIARDKDKTNPELRNWIQNLDLVEPDSDDDETDDDSA TEEDIRSRHEEDMETETELSVTDNNTSGIENESIEKLSSLTESKDSGETEGSTAEEKDTTAEKTAEDSNSQSNISHTEEL NEKNSNLVNNSESVQDSESVNNISSAGACPSNDSSEQKTEESSVTINDSIEENKKEDISLRDDDNSDTLSADSIRYESET GGDDSQGPYSVIGPSGDGQQGEGLGRQGRGTDNVSVVIENPFQHCERNLLEHILRIQNELEKRMDMIEEQVSALEAADST FQAPNQSHNILSDVPQLKRSLYMLQNDLEKVKLMSTYHR |
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