Gene
| Gene Model ID | pfu_aug2.0_97.1_23431 |
|---|---|
| Locus | scaffold97.1 : 28867 ... 35745 : - |
| To GenomeBrowser | scaffold97.1:28867..35745 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_1167.1_43914 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23431.t1 | 1 | 1 | DUF1143 | 9 | 129 | 2.5e-34 | 118.4 | 2.1e-38 | 3.1e-34 | 118.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23431.t1 | gi|676459604|ref|XP_009055354.1| | hypothetical protein LOTGIDRAFT_203076 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_97.1_23431.t1 | gi|260793601|ref|XP_002591800.1| | hypothetical protein BRAFLDRAFT_123540 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_97.1_23431.t1 | gi|72011693|ref|XP_785712.1| | PREDICTED: UPF0686 protein C11orf1 homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_97.1_23431.t1 | gi|72041864|ref|XP_784695.1| | PREDICTED: UPF0686 protein C11orf1 homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_97.1_23431.t1 | gi|198436617|ref|XP_002127073.1| | PREDICTED: UPF0686 protein C11orf1 homolog [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23431.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23431.t1 atggcgctctccgaattagacttagacccgccttttcgctcaatggtgagggccagcggtcttgctgaggtgtggacaca cagcacagaggcggccaagttcgaccaattcgggtggaggtgcacaaacaaagaaacatcatactcaaacgatacgctga taggtaattggaatgagcagagatttgatatagagaaagccaaaatacctcaacgacttcctggtcagcatgagcattat tttgagacatcatatggcgttggttataacaaagtaccttatgaggtacctaaggaattacaacatctaaaaggccgcca ttcccacgccttcccaggacatcagccagagctagacagtatgaaacttaaacagacctacaacagctgggaaacgacca cacgggccggctacgtggatcctagaattagaaaggaaccagtacagaaccctgtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_97.1_23431.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23431.t1 MALSELDLDPPFRSMVRASGLAEVWTHSTEAAKFDQFGWRCTNKETSYSNDTLIGNWNEQRFDIEKAKIPQRLPGQHEHY FETSYGVGYNKVPYEVPKELQHLKGRHSHAFPGHQPELDSMKLKQTYNSWETTTRAGYVDPRIRKEPVQNPV |
|