Gene
| Gene Model ID | pfu_aug2.0_97.1_23435 |
|---|---|
| Locus | scaffold97.1 : 109996 ... 113741 : + |
| To GenomeBrowser | scaffold97.1:109996..113741 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_102253.1_49560 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23435.t1 | 1 | 1 | RDD | 141 | 288 | 6.1e-07 | 29.4 | 2.0e-10 | 3.0e-06 | 27.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23435.t1 | gi|524878981|ref|XP_005096170.1| | PREDICTED: protein FAM8A1-like [Aplysia californica] | 2.8026e-45 |
| pfu_aug2.0_97.1_23435.t1 | gi|260798662|ref|XP_002594319.1| | hypothetical protein BRAFLDRAFT_275607 [Branchiostoma floridae] | 4.0e-31 |
| pfu_aug2.0_97.1_23435.t1 | gi|585686655|ref|XP_006820365.1| | PREDICTED: protein FAM8A1-like [Saccoglossus kowalevskii] | 1.0e-30 |
| pfu_aug2.0_97.1_23435.t1 | gi|676443490|ref|XP_009050131.1| | hypothetical protein LOTGIDRAFT_142019, partial [Lottia gigantea] | 1.0e-28 |
| pfu_aug2.0_97.1_23435.t1 | gi|532023728|ref|XP_005355203.1| | PREDICTED: protein FAM8A1 [Microtus ochrogaster] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23435.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23435.t1 atggatcagaaagtcgaaagtaaacctgcaaaaaaagaagaatcacaaaactatagtttccagcatccaaataacgcaaa cgaaaataattctaagaattttaccacaaattgtgaatatgaaaacacatttttcacaaataatgacaaaaattaccaaa atatggttgaatatgcaagagatcttcaaccatggctttaccaatatcggttttggaactcattcagttcgttctcggct atgatgccttattacatgatgcagtatctcccacctgttagtccagtggctcatggaaatgtaaatcagactggaactag tggtcaacaaagaggacacgaatctcgcccagctccaaatttaagacaaggggaggtaaatcaacaagaacaacaaagag taataggtacagagtatgtgttgccttctctaatcaggaggatggctgcagagctcattgacttcattgtcctgttttac ctgaaagtgatgctgactgtgatggttttacgtcatatgggatatttgagagatgataatctattagaggtaagactgga tgtaatacctatactggatctggcagagatggatgtagaaaaagtatttaatgtcacatcagagatcattgccttggaaa taataaataggatcatgatcacaatatttgaggtggtgtcctgtgaacaagtccaggagacaaggaacggaaaagtttta gtgataccagccagggatccaggatttattagtgcacttgtgagatctgtgatcaaaaattttaccatggcctttttctt ccctgcatgccttactgtgttcttttttcaacataacagagctgcctatgatgttttggcaaaaactatagtagtgcaat cagatgatccaagatggagatga |
|
Protein
| Protein ID | pfu_aug2.0_97.1_23435.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23435.t1 MDQKVESKPAKKEESQNYSFQHPNNANENNSKNFTTNCEYENTFFTNNDKNYQNMVEYARDLQPWLYQYRFWNSFSSFSA MMPYYMMQYLPPVSPVAHGNVNQTGTSGQQRGHESRPAPNLRQGEVNQQEQQRVIGTEYVLPSLIRRMAAELIDFIVLFY LKVMLTVMVLRHMGYLRDDNLLEVRLDVIPILDLAEMDVEKVFNVTSEIIALEIINRIMITIFEVVSCEQVQETRNGKVL VIPARDPGFISALVRSVIKNFTMAFFFPACLTVFFFQHNRAAYDVLAKTIVVQSDDPRWR |
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