Gene
| Gene Model ID | pfu_aug2.0_97.1_23445 |
|---|---|
| Locus | scaffold97.1 : 301397 ... 315174 : - |
| To GenomeBrowser | scaffold97.1:301397..315174 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_17766.1_25656 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| multidrug resistance | GO:0003824 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23445.t1 | 3 | 1 | Miro | 266 | 323 | 2.4e-06 | 28.0 | 1.6 | 830.0 | 0.4 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 1 | ABC_membrane | 304 | 572 | 1.7e-40 | 139.1 | 3.3e-32 | 1.7e-29 | 103.0 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 1 | ABC_tran | 634 | 768 | 0.0 | 168.2 | 2.8e-21 | 1.5e-18 | 67.4 |
| pfu_aug2.0_97.1_23445.t1 | 3 | 1 | AAA_25 | 640 | 683 | 6.2e-07 | 29.0 | 3.6e-05 | 0.019 | 14.3 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 1 | AAA_29 | 640 | 664 | 2.3e-06 | 27.0 | 0.00091 | 0.48 | 9.9 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 1 | AAA_16 | 641 | 674 | 1.2e-06 | 28.6 | 0.00015 | 0.078 | 12.9 |
| pfu_aug2.0_97.1_23445.t1 | 4 | 1 | SMC_N | 644 | 669 | 2.6e-10 | 39.9 | 0.011 | 5.7 | 6.1 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 1 | MMR_HSR1 | 647 | 684 | 1.0e-07 | 31.9 | 4.8e-06 | 0.0026 | 17.7 |
| pfu_aug2.0_97.1_23445.t1 | 3 | 2 | Miro | 647 | 686 | 2.4e-06 | 28.0 | 7.1e-07 | 0.00038 | 20.9 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 1 | AAA_21 | 647 | 667 | 9.9e-06 | 25.7 | 0.015 | 7.7 | 6.3 |
| pfu_aug2.0_97.1_23445.t1 | 4 | 2 | SMC_N | 705 | 815 | 2.6e-10 | 39.9 | 0.0085 | 4.5 | 6.4 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 2 | ABC_membrane | 911 | 1010 | 1.7e-40 | 139.1 | 3.3e-12 | 1.8e-09 | 37.4 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 2 | ABC_tran | 1085 | 1234 | 0.0 | 168.2 | 2.2e-31 | 1.1e-28 | 100.1 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 2 | AAA_29 | 1088 | 1118 | 2.3e-06 | 27.0 | 1.4e-05 | 0.0074 | 15.7 |
| pfu_aug2.0_97.1_23445.t1 | 4 | 3 | SMC_N | 1090 | 1117 | 2.6e-10 | 39.9 | 0.0029 | 1.5 | 7.9 |
| pfu_aug2.0_97.1_23445.t1 | 3 | 2 | AAA_25 | 1092 | 1116 | 6.2e-07 | 29.0 | 0.00026 | 0.14 | 11.5 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 2 | MMR_HSR1 | 1099 | 1118 | 1.0e-07 | 31.9 | 0.00043 | 0.23 | 11.4 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 2 | AAA_16 | 1099 | 1233 | 1.2e-06 | 28.6 | 0.00016 | 0.085 | 12.8 |
| pfu_aug2.0_97.1_23445.t1 | 3 | 3 | Miro | 1099 | 1116 | 2.4e-06 | 28.0 | 0.071 | 38.0 | 4.8 |
| pfu_aug2.0_97.1_23445.t1 | 2 | 2 | AAA_21 | 1100 | 1167 | 9.9e-06 | 25.7 | 0.00025 | 0.13 | 12.1 |
| pfu_aug2.0_97.1_23445.t1 | 4 | 4 | SMC_N | 1129 | 1274 | 2.6e-10 | 39.9 | 2.9e-06 | 0.0016 | 17.7 |
| pfu_aug2.0_97.1_23445.t1 | 3 | 3 | AAA_25 | 1224 | 1262 | 6.2e-07 | 29.0 | 2.1 | 1100.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23445.t1 | gi|242014418|ref|XP_002427888.1| | multidrug resistance protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_97.1_23445.t1 | gi|514741530|ref|XP_005018522.1| | PREDICTED: multidrug resistance-associated protein 1 isoform X4 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_97.1_23445.t1 | gi|292611895|ref|XP_001341895.3| | PREDICTED: multidrug resistance-associated protein 1 [Danio rerio] | 0.0 |
| pfu_aug2.0_97.1_23445.t1 | gi|701423988|ref|XP_010001595.1| | PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1 [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_97.1_23445.t1 | gi|704562757|ref|XP_010183267.1| | PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1-like, partial [Mesitornis unicolor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23445.t1 atgaataactctgtagacgtggaatctatgacaccatgtaaaatgatggaagagaatgaacataatgatacggattggat gaaaaacagcaaatttctttggatattcttcacattgtgtatgatgttcagcgctaaagcaaatggtggaaaggatcctc acttaactaaatcagagtatagaccaaggattaaaaaggtgatctctgggtggttatacttgttactacttattgaccta tcgatgaagatgcaggactacataaatggacagaaccacaacttaatcaatgttgtagaaccactacttctgacaattac aacgtttcttgcaacatcctccgaacaaaacggaaagcaaaccaagaaaatgttgtatggcttcttgctagccttgatcg gaaaacaagcaattactttttactggcatgccactgaggcgatcaacgaagaaaagggtatttcagaataccataaactg ttcattagcggtgctctgttagctgcctttgttgctcacttattgtttacacttgttgctcatggagaagaaacacaacc gtcagaggaggaaagtaaacagaaaactgccgaggagagagcttcactactatcaagaattacatttacatggttgaacg atttgctgcgacttggctacaaaaagactcttgaaaataaggatttatcggaactggcagaagaaagaaaggctgaaaac gcattttcccacttcaatccacactggcaaaaagaattccagaaagcaaaaagtacaaatgacgctacacaagagaatga aaccccagagcaatcagaggaaacaaaaattgacgaaaaaacagaattcaagaaagttgaaggaagtgttgtgcgagcca ttgttcttgcttttggtctgacttattcctatgcagtcctaatggaaattgttctcaagctttatgaattttctgtgcca atggttttgaaacaacttatgaagacggtagaggatgagaaccagacattactgagaggcatcttgtttgctgtcatgct ctttgtgatcaattctctgagaagccttcacggaaatcagctaatttatcataaatgtaacctggaatacagactgaaag ctgcccttatgtcatctatttactcaaagatgctgaaaatgtcccatgctgccaggaagtcttctactgtgggtgaaatc gtcaacttgatgtccgtagactgtggaaggtttgccactatggtacattggttccactacatccttatagcaccaattca ggtcttcgtcgccatgtatctgttatggctagaaatgggttcatgtgccatcgctggattcttggccatcgctgttttct ttcccatccatggtttactcggaagaaaaacgagagctcttcatattaaattatcggagaccaaagattcgaggattaaa ctaatgaatgagattctcaacggcattaaggtcatgaagctgtacacatgggagaaatcctttgaaaagaaagttcagga catcagggagaaagaactgtcaataatgagaaaaataaagatctacgattctatcagtactcttgtttggaacattggac cattcttggtgtctttgtccacttttgctctgtatgtcctaggcgatgattctcatacactcagcgtcgagaaagccttt gtttccattgctatcttcgacatattgagttggtcaatgtcagtaattccccatattatgactggaatgaaccagggatt tgtttccatcaagagaatcaacaagtttctgaacagcgaagaactggatgatgacgtaataagcaggagtaaagatcatg aatctgcaatatcagtgaaagatgcttcattctcatgggacaaaaaggaagttccacttctgaaaaatatcaacatagaa attcctgaaggatccctgatagccgttgttgggtctgttggtgttggaaaatcttccctcctctccgccatgttgggcga aatggacaaaaaatctggaaatgtgaacatcaagggtacaactgcttatgtggctcaacaagcctggatccaaaataaca cactgaaagacaacattctctttggacgtccatatgacaaagatgtgtacgaaaacatcattgagagttgtgctcttggt cctgatatagacatgttaccaggaggtcatctggctgaaataggagaaaagggaattaatctgagcgggggacaaaagca gagggtgaacatggcacgagctgtttaccaggatgctgatatttacctgtttgatgacccactcagtgcagtagactcac atgttgggaaacatatattcaacaatgtaatcggaagaactggcgtcctcaagaacaagaccagaattttagttactcat ggtgtcaacttcttgccaaaagtagataagatcatcaccattcaagatgggacgatatcagaaatgggaacatatgaaga acttaaggcacgatctggagcattcgcccagttcttgaaaacttacatgaaagaggatgattcaagtgattccagtgaaa gtgaaaatgagggaaaagggaaaaaatcaacaaaaagaaggcattctgagagaacccaagataactcacaggaacaaggc aacacaagtcagagtaatggcaatactgaagatgagtccaaagcgatcggagaggaatccgttgagacaggaaaggaatt ccatagtcctagttcaagacagctgaaaagactggagtccgcgaacaaatcaccaatgtacacacattttagcgaatcca tcaacggagtatcaacgatccgtgcttaccaacagcagtccagatttgagtcggagtcaagagcaagaattgatacatat cacaaaagcttgctgagtctattcaacattcacagatggtttggcattagagtggaagttttggccaatggattggattt atttgtaacgctgtttgccatcttttcaagagacattttaactgccggagtagttgccttatgtatcacacataccatga atacgacacatacaatgaactggttcatgcacgtgacgatgaatactgaagaagatctagtctctattgaaagagtcaac gagtttattgataaaccaactgaggctccttgggaaatagaggaaacaaagccttgctcaagctggccaagatctgggaa aataagcataaaagactaccgagtcagatacagagaaggtcaagaccttgtccttaaaggaatcaccagtgacattaaac caggagagaaggtggttggcatagttgggagaactggtagcggtaaatcaactttaaccttggcattgttccgtatcatc gaaagtgctggaggaaatatcgccattgacgatgttgacatctccaagataggtctccatgatctgaggtcaaagcttac aattattccacaggatccagtcatcttttctggtacactacggatgaatcttgatccctttgaacaatactctgacgagg aaatttggacagcattagagcatgcgcatcttggaaagttcgtgagatcactacccgataaactcaagcacgagtgttca gaaggtggagaaaatttaagtgttggacaacggcagcttatctgcttggcacgtgccctcttgaagaaaacgaaaattct cattcttgatgaagccacagctgctgttgacatggaaacagatgatctgattcagaaaactataagaactgagtttgctg attgtactgttctcactattgcacatagacttaatacaatcatggactacaaaagaatcatggtgctagacaaaggtaga atagcggagtttgactcaccagccaaattgttggctaataatgacagtatattttacggaatggcaagagattctaatct agtttaa |
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Protein
| Protein ID | pfu_aug2.0_97.1_23445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23445.t1 MNNSVDVESMTPCKMMEENEHNDTDWMKNSKFLWIFFTLCMMFSAKANGGKDPHLTKSEYRPRIKKVISGWLYLLLLIDL SMKMQDYINGQNHNLINVVEPLLLTITTFLATSSEQNGKQTKKMLYGFLLALIGKQAITFYWHATEAINEEKGISEYHKL FISGALLAAFVAHLLFTLVAHGEETQPSEEESKQKTAEERASLLSRITFTWLNDLLRLGYKKTLENKDLSELAEERKAEN AFSHFNPHWQKEFQKAKSTNDATQENETPEQSEETKIDEKTEFKKVEGSVVRAIVLAFGLTYSYAVLMEIVLKLYEFSVP MVLKQLMKTVEDENQTLLRGILFAVMLFVINSLRSLHGNQLIYHKCNLEYRLKAALMSSIYSKMLKMSHAARKSSTVGEI VNLMSVDCGRFATMVHWFHYILIAPIQVFVAMYLLWLEMGSCAIAGFLAIAVFFPIHGLLGRKTRALHIKLSETKDSRIK LMNEILNGIKVMKLYTWEKSFEKKVQDIREKELSIMRKIKIYDSISTLVWNIGPFLVSLSTFALYVLGDDSHTLSVEKAF VSIAIFDILSWSMSVIPHIMTGMNQGFVSIKRINKFLNSEELDDDVISRSKDHESAISVKDASFSWDKKEVPLLKNINIE IPEGSLIAVVGSVGVGKSSLLSAMLGEMDKKSGNVNIKGTTAYVAQQAWIQNNTLKDNILFGRPYDKDVYENIIESCALG PDIDMLPGGHLAEIGEKGINLSGGQKQRVNMARAVYQDADIYLFDDPLSAVDSHVGKHIFNNVIGRTGVLKNKTRILVTH GVNFLPKVDKIITIQDGTISEMGTYEELKARSGAFAQFLKTYMKEDDSSDSSESENEGKGKKSTKRRHSERTQDNSQEQG NTSQSNGNTEDESKAIGEESVETGKEFHSPSSRQLKRLESANKSPMYTHFSESINGVSTIRAYQQQSRFESESRARIDTY HKSLLSLFNIHRWFGIRVEVLANGLDLFVTLFAIFSRDILTAGVVALCITHTMNTTHTMNWFMHVTMNTEEDLVSIERVN EFIDKPTEAPWEIEETKPCSSWPRSGKISIKDYRVRYREGQDLVLKGITSDIKPGEKVVGIVGRTGSGKSTLTLALFRII ESAGGNIAIDDVDISKIGLHDLRSKLTIIPQDPVIFSGTLRMNLDPFEQYSDEEIWTALEHAHLGKFVRSLPDKLKHECS EGGENLSVGQRQLICLARALLKKTKILILDEATAAVDMETDDLIQKTIRTEFADCTVLTIAHRLNTIMDYKRIMVLDKGR IAEFDSPAKLLANNDSIFYGMARDSNLV |
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