Gene
| Gene Model ID | pfu_aug2.0_97.1_23447 |
|---|---|
| Locus | scaffold97.1 : 354245 ... 355086 : - |
| To GenomeBrowser | scaffold97.1:354245..355086 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily d member 3-like isoform x2 | GO:0005249 GO:0006811 GO:0016020 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23447.t1 | 1 | 1 | Ion_trans | 15 | 153 | 8.5e-06 | 25.1 | 1.5e-09 | 1.1e-05 | 24.7 |
| pfu_aug2.0_97.1_23447.t1 | 1 | 1 | Ion_trans_2 | 80 | 155 | 6.8e-13 | 48.1 | 4.5e-16 | 3.3e-12 | 45.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23447.t1 | gi|658858725|ref|XP_008412068.1| | PREDICTED: potassium voltage-gated channel subfamily D member 3-like isoform X2 [Poecilia reticulata] | 3.0e-17 |
| pfu_aug2.0_97.1_23447.t1 | gi|617418738|ref|XP_007557765.1| | PREDICTED: potassium voltage-gated channel subfamily D member 3 [Poecilia formosa] | 3.0e-17 |
| pfu_aug2.0_97.1_23447.t1 | gi|658858723|ref|XP_008412067.1| | PREDICTED: potassium voltage-gated channel subfamily D member 3-like isoform X1 [Poecilia reticulata] | 3.0e-17 |
| pfu_aug2.0_97.1_23447.t1 | gi|213623812|gb|AAI70254.1| | Kcnd3-A protein [Xenopus laevis] | 4.0e-17 |
| pfu_aug2.0_97.1_23447.t1 | gi|551519572|ref|XP_005811281.1| | PREDICTED: potassium voltage-gated channel subfamily D member 3-like [Xiphophorus maculatus] | 4.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23447.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23447.t1 atgtggtgtgatttttttgttttggtgtcggtattttgtctgaacatcatagatcagacagatctcctttgtagtattta cgctttctccgtacatatcataggaatttgggtgggattcgtgtacggtttcagaatcattaaaatcttacggttaatca atcactcgcactatagtatagctctttatatgacatccaaggcttgcttctcttttgtcttccacttcctcttcgtttac ttcacgttatgtcttctatctgcaacaataatatactttgcagaaatttgggccacatcttcctttatggatattttttc gtcagtatggtgggccgttatcaccataagtagtgtaggatatggtgatatggtaccagaaactgtcgccgggaaggtgt gtaccgtaattattatcctattcggtttattactagtttccatcccgtttgttatcatcaccagtaaatatggcgattat tacacttgctacgaaaatatcaagaaacatgaagcagaagatgacgaaattgaagaagacacattatgttga |
|
Protein
| Protein ID | pfu_aug2.0_97.1_23447.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23447.t1 MWCDFFVLVSVFCLNIIDQTDLLCSIYAFSVHIIGIWVGFVYGFRIIKILRLINHSHYSIALYMTSKACFSFVFHFLFVY FTLCLLSATIIYFAEIWATSSFMDIFSSVWWAVITISSVGYGDMVPETVAGKVCTVIIILFGLLLVSIPFVIITSKYGDY YTCYENIKKHEAEDDEIEEDTLC |
|