Gene
| Gene Model ID | pfu_aug2.0_97.1_23448 |
|---|---|
| Locus | scaffold97.1 : 361657 ... 363931 : + |
| To GenomeBrowser | scaffold97.1:361657..363931 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_89861.1_64056 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel protein shaw | GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23448.t1 | 1 | 1 | BTB_2 | 10 | 100 | 1.1e-19 | 70.4 | 4.1e-23 | 2.0e-19 | 69.5 |
| pfu_aug2.0_97.1_23448.t1 | 2 | 1 | Ion_trans | 150 | 175 | 1.3e-11 | 44.1 | 0.19 | 950.0 | -1.2 |
| pfu_aug2.0_97.1_23448.t1 | 3 | 1 | Ion_trans_2 | 158 | 165 | 2.6e-13 | 49.4 | 0.64 | 3200.0 | -2.1 |
| pfu_aug2.0_97.1_23448.t1 | 2 | 2 | Ion_trans | 214 | 397 | 1.3e-11 | 44.1 | 2.6e-15 | 1.3e-11 | 44.1 |
| pfu_aug2.0_97.1_23448.t1 | 3 | 2 | Ion_trans_2 | 304 | 316 | 2.6e-13 | 49.4 | 0.53 | 2600.0 | -1.8 |
| pfu_aug2.0_97.1_23448.t1 | 3 | 3 | Ion_trans_2 | 325 | 398 | 2.6e-13 | 49.4 | 5.4e-17 | 2.6e-13 | 49.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23448.t1 | gi|755938679|ref|XP_011297514.1| | PREDICTED: potassium voltage-gated channel protein Shaw [Fopius arisanus] | 0.0 |
| pfu_aug2.0_97.1_23448.t1 | gi|195996127|ref|XP_002107932.1| | hypothetical protein TRIADDRAFT_1922 [Trichoplax adhaerens] | 5.60519e-45 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23448.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23448.t1 atggcagacacaagtcaattccaaggaattaagctgaatctgagagggacagttttctatacaaattctgtaaaattcaa agcattcccggactcccgtctggcaaagctgacgtcatcaacaactccgtatcacgctaacaaggatgaaatttacttcg acagaaatccagcacttttccattacattttggatatatatgacaaaggaaccctccatctgccttcaaatgtttgctca tctatgattaaaggggaattagattactggcagctaaggaaggagatagtagccaaatgttgcttgaagtctctgtatca agatgacgacgatgtccgtatccacaaggagtatgaagccattttcaaggagtatatgtatgaaaatactggaacaggag aaccattgccattgaggcagaaaatttggagtatatttgtaaatccattctcgtcatgtattgcaaagatatattatgcc acggttgtcactacagttttgatttcaattgtgatactctcaatgtcaactttatctgatttccgagaaccaaaaactaa agccatcaatgttaccgaaggctttgcaacagataagatataccaatatttgtctacccgcccatatttgtctttagcca ttgcggacctagtaacaaacaccattctggcgatcgattttgccattgttattttttctcatccaagtcgcctaaaagct tttaagaactggtattatggtatggatctgattgcactattgtcaatttacgtattccatattcttgaccaaggcgagtt tctgacatatctaagcgaggcccatgtacgtttcatgacgggatggtttggtgccgttttctgttttcgaatattgcgaa tcttgcgtttgatgagtcacacaaaaggttgggtcgcactctatatgacatttgcctctaacacttccgttattttattt ttccttgtaggattctttttcgtctgtctaatgtctgggaccataatgtatcacgcagaactatggtcttcaaagtcctt cgagaatatatttgcctcgatgtggtgggcggtggtaaccttgagtagtgtaggatacggagacgtagtccctgaaactg tacccggtcaagtcataactgtagctgtgattatctttggactgttgttgatagccattccatttgtcttgataacaagt aactacggaagctattacacatgctatgacaatatcttaagacatatggaaccagaagaggaacagaaaactaattccta tagcacaacttatgcagtgaaggaatga |
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Protein
| Protein ID | pfu_aug2.0_97.1_23448.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23448.t1 MADTSQFQGIKLNLRGTVFYTNSVKFKAFPDSRLAKLTSSTTPYHANKDEIYFDRNPALFHYILDIYDKGTLHLPSNVCS SMIKGELDYWQLRKEIVAKCCLKSLYQDDDDVRIHKEYEAIFKEYMYENTGTGEPLPLRQKIWSIFVNPFSSCIAKIYYA TVVTTVLISIVILSMSTLSDFREPKTKAINVTEGFATDKIYQYLSTRPYLSLAIADLVTNTILAIDFAIVIFSHPSRLKA FKNWYYGMDLIALLSIYVFHILDQGEFLTYLSEAHVRFMTGWFGAVFCFRILRILRLMSHTKGWVALYMTFASNTSVILF FLVGFFFVCLMSGTIMYHAELWSSKSFENIFASMWWAVVTLSSVGYGDVVPETVPGQVITVAVIIFGLLLIAIPFVLITS NYGSYYTCYDNILRHMEPEEEQKTNSYSTTYAVKE |
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