Gene
| Gene Model ID | pfu_aug2.0_97.1_23452 |
|---|---|
| Locus | scaffold97.1 : 496498 ... 498866 : - |
| To GenomeBrowser | scaffold97.1:496498..498866 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_1892.1_66137 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pre-b-cell leukemia transcription factor 3d | GO:0003677 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23452.t1 | 4 | 1 | Homeobox_KN | 250 | 267 | 1.5e-23 | 82.2 | 0.63 | 2300.0 | -1.7 |
| pfu_aug2.0_97.1_23452.t1 | 3 | 1 | Homeobox | 256 | 267 | 1.2e-20 | 72.8 | 0.28 | 1100.0 | -0.7 |
| pfu_aug2.0_97.1_23452.t1 | 3 | 2 | Homeobox | 451 | 502 | 1.2e-20 | 72.8 | 5.0e-11 | 1.8e-07 | 30.6 |
| pfu_aug2.0_97.1_23452.t1 | 4 | 2 | Homeobox_KN | 463 | 502 | 1.5e-23 | 82.2 | 1.5e-12 | 5.5e-09 | 35.5 |
| pfu_aug2.0_97.1_23452.t1 | 3 | 3 | Homeobox | 538 | 589 | 1.2e-20 | 72.8 | 1.3e-13 | 4.7e-10 | 38.9 |
| pfu_aug2.0_97.1_23452.t1 | 4 | 3 | Homeobox_KN | 549 | 588 | 1.5e-23 | 82.2 | 7.9e-15 | 2.9e-11 | 42.8 |
| pfu_aug2.0_97.1_23452.t1 | 4 | 4 | Homeobox_KN | 592 | 601 | 1.5e-23 | 82.2 | 1.7 | 6300.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23452.t1 | gi|675873996|ref|XP_009022558.1| | hypothetical protein HELRODRAFT_67319 [Helobdella robusta] | 2.0e-11 |
| pfu_aug2.0_97.1_23452.t1 | gi|470298301|ref|XP_004346127.1| | pre-B-cell leukemia transcription factor 3D [Capsaspora owczarzaki ATCC 30864] | 3.0e-10 |
| pfu_aug2.0_97.1_23452.t1 | gi|675875198|ref|XP_009023159.1| | hypothetical protein HELRODRAFT_162815 [Helobdella robusta] | 1.0e-08 |
| pfu_aug2.0_97.1_23452.t1 | gi|669145282|ref|XP_008608203.1| | hypothetical protein SDRG_04312 [Saprolegnia diclina VS20] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23452.t1 atggcaaaccacagtggttacttccctcagtggtcaggttacagcagttactggtccagaccttcatcatatacaacaga ctatgtatcaccaacaaagccagaggtatcaagcttcaagatcagtccaaccaagatgtcaccatggcaaccagctcaac ccactttccaactaagtcctcaaaagacatctttttggcaaccagggatgccaaactttaataccagtctaaaccacaga tcaccatggaaaccgatgatgaccagcctcaagaccagttcctcagcaacccattacgcatcctacctacaagccactcc agcaaaccaaatgccaaaccatccaatgggaagcagcctaacaacaagcccagagatcagaagtcctacatccatcaatc acttcaacagttactatagcagaataccagcctacccagcaactaccagtctacaacgcctccacaacaaccctatgttt caggatctacaggacttgctgacagaggaatgcttacacatgcaggttcccaccaaccttgttaatacagcctgggctga caccacacccaccttaccaaccccaggacaggatatgttctccaaacacatcagactgcaagaaactcttttgcaacttc gatctgatgaaaagtttcgcagcagtggtttggacattgagtcaaagtacagcgcagaagtaggacagatagaggtttcc agataccaagcccttcatgcagccggtactaactactcagagagacaaacagtcaacaaccactttgacaacaaaagaat ttcattgattcagatttgccagtcacaaattgatgcagctttaagtagacgtactacagatatcctagaaattccaacct acccaacacaagcagccagctccttctactcaacagagactgaatgcagaagcagtgcctttcagccatacagtaatgtt tcagaaagaagccaaccaagaactcctgaagatgttgcagtgccagatcctaatgatgtcaccgtaagcagcgaagaatt aactcaaccaggattttcagactctggatgcttcagtgatgacagtgcctcaaagaccttcaactccaccatagatattc tacagcaagccagtgagattagtggaatctctgatgaactcttcccaccttctcctagcgatggtttcacagacattaca cagcatcagcagttgtttgaacctgaacagtatgcagaccagacaacatttactcctgacttatccagaatccaaacagc agatccaacctatgatgatgttgaatccaagcgacagtgcccagcagttaggatgaggggacgcagtaagcaactgacag atgagcagactgctatcctcagtgcctggtacagtcaacacatcaactacccatatccagctgaagaagatgtcgccagc ttgacagaagccactggtctgaatgataagcaggtgaagaaatggatgtccaacaagagagtacgcagctacaacacctt gtccatcactggtaaccagcatcccatcaaactaaagtacaaggcacaaaagcagacaacaaaagctcagcagacaacag ctttccagcagatatcccaagaagccaagcagattctgaatgaatggtatgatactcacatttcacatccttacccaagt gatgaggagagatccatgctagccacacaaactggagttccagagtccaagatcaagtcttggttcgctaacaagagaag cagaagtcacaataccaagagacaagttcccaactacttcatcaagaaattcccagagtacactacccatgtgcagatgg tgagcatcagccgagaacttaccaggaagaccaagagacaacttctggacactacccttgatgtcacacagatgtgccga ttttaa |
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Protein
| Protein ID | pfu_aug2.0_97.1_23452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23452.t1 MANHSGYFPQWSGYSSYWSRPSSYTTDYVSPTKPEVSSFKISPTKMSPWQPAQPTFQLSPQKTSFWQPGMPNFNTSLNHR SPWKPMMTSLKTSSSATHYASYLQATPANQMPNHPMGSSLTTSPEIRSPTSINHFNSYYSRIPAYPATTSLQRLHNNPMF QDLQDLLTEECLHMQVPTNLVNTAWADTTPTLPTPGQDMFSKHIRLQETLLQLRSDEKFRSSGLDIESKYSAEVGQIEVS RYQALHAAGTNYSERQTVNNHFDNKRISLIQICQSQIDAALSRRTTDILEIPTYPTQAASSFYSTETECRSSAFQPYSNV SERSQPRTPEDVAVPDPNDVTVSSEELTQPGFSDSGCFSDDSASKTFNSTIDILQQASEISGISDELFPPSPSDGFTDIT QHQQLFEPEQYADQTTFTPDLSRIQTADPTYDDVESKRQCPAVRMRGRSKQLTDEQTAILSAWYSQHINYPYPAEEDVAS LTEATGLNDKQVKKWMSNKRVRSYNTLSITGNQHPIKLKYKAQKQTTKAQQTTAFQQISQEAKQILNEWYDTHISHPYPS DEERSMLATQTGVPESKIKSWFANKRSRSHNTKRQVPNYFIKKFPEYTTHVQMVSISRELTRKTKRQLLDTTLDVTQMCR F |
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