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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_970.1_01283
Locus scaffold970.1 : 50317 ... 59285 : -
To GenomeBrowser scaffold970.1:50317..59285
Genes list of scaffold scaffold970.1
Synonym pfu_aug1.0_8933.1_60524

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_970.1_01283.t1 2 1 Cyclin_N 18 144 6.1e-25 87.2 9.2e-29 1.4e-24 86.1
pfu_aug2.0_970.1_01283.t1 2 2 Cyclin_N 212 252 6.1e-25 87.2 0.066 980.0 -0.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_970.1_01283.t1 gi|524912570|ref|XP_005111131.1| PREDICTED: cyclin-I-like [Aplysia californica] 0.0
pfu_aug2.0_970.1_01283.t1 gi|260786520|ref|XP_002588305.1| hypothetical protein BRAFLDRAFT_265991 [Branchiostoma floridae] 0.0
pfu_aug2.0_970.1_01283.t1 gi|676469880|ref|XP_009058675.1| hypothetical protein LOTGIDRAFT_191775 [Lottia gigantea] 0.0
pfu_aug2.0_970.1_01283.t1 gi|677974118|ref|XP_009072096.1| PREDICTED: cyclin-I [Acanthisitta chloris] 0.0
pfu_aug2.0_970.1_01283.t1 gi|632943759|ref|XP_007887131.1| PREDICTED: cyclin-I [Callorhinchus milii] 0.0

Transcript
Transcript IDpfu_aug2.0_970.1_01283.t1
Definition-
>pfu_aug2.0_970.1_01283.t1
atggcacatactaacgggttagatgctcagcatctgatgaagatgctcggggaactccttcacaaggagcaggaaaagtg
gaatccaaaagttttcaaagtcactggtcacacagaaatggaggttcttggacaacaccgtgacagaatcgtgaagtgga
tactgtctctgaataaagaattccgatttttaccagaaactcttggcctgtgtattagtctgttggacagattcctgaat
cttgtaaaggtccgccccaagtatctaccctgtgtcgccattagctgcctctacatcgcagccaaaaccctggaggagga
tgaagtcatccccagcactgtggatttagtgaagacgatcaactgtgtgtgtactgtggccgaggtgctaagaatggaag
ccattgtccttaataaactatcctgggacattaaaagggtcactcctgttgattttctacatgtaattcacagtctgtta
atgtactaccacccccagttgttggatgttctttgtaacgtcacaccctcacagttactgacactccttaccaggaaaac
gctcaactgtctctcgttacatcaactcagcagttatcgtccctcggtcatcactctagcagtcgtcagtttagagttgg
aacagattacgacagcttggctctccatctgtgtcatggtgcagaagatgcttgatatcaacatggaatcttttgttaaa
tgtcgggaaatagttggacagttccttagccagcaaggcttgttacaatcaggttacaagtttcgatccatcagacgctc
caaatcaatgaagagaaaagctatagatgacgatgactattgtgacgagatctacgagggaattaaacgactgtacaatg
aggatgtttctatggagtttaatgttgacatgaggatgtcatgtggcaaagaagtcaatcagcaccaagatattgatccc
agaaataacttttgcattccagctgtaagcgctaattaa

Protein
Protein IDpfu_aug2.0_970.1_01283.t1
Definition-
>pfu_aug2.0_970.1_01283.t1
MAHTNGLDAQHLMKMLGELLHKEQEKWNPKVFKVTGHTEMEVLGQHRDRIVKWILSLNKEFRFLPETLGLCISLLDRFLN
LVKVRPKYLPCVAISCLYIAAKTLEEDEVIPSTVDLVKTINCVCTVAEVLRMEAIVLNKLSWDIKRVTPVDFLHVIHSLL
MYYHPQLLDVLCNVTPSQLLTLLTRKTLNCLSLHQLSSYRPSVITLAVVSLELEQITTAWLSICVMVQKMLDINMESFVK
CREIVGQFLSQQGLLQSGYKFRSIRRSKSMKRKAIDDDDYCDEIYEGIKRLYNEDVSMEFNVDMRMSCGKEVNQHQDIDP
RNNFCIPAVSAN

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