Gene
| Gene Model ID | pfu_aug2.0_970.1_01292 |
|---|---|
| Locus | scaffold970.1 : 199480 ... 205102 : + |
| To GenomeBrowser | scaffold970.1:199480..205102 |
| Genes list of scaffold | scaffold970.1 |
| Synonym | pfu_aug1.0_11493.1_53706 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_970.1_01292.t1 | 1 | 1 | Ependymin | 60 | 190 | 1.3e-26 | 92.8 | 1.1e-30 | 1.6e-26 | 92.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_970.1_01292.t1 | gi|676471390|ref|XP_009059163.1| | hypothetical protein LOTGIDRAFT_218124 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_970.1_01292.t1 | gi|676471393|ref|XP_009059164.1| | hypothetical protein LOTGIDRAFT_233900 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_970.1_01292.t1 | gi|676471387|ref|XP_009059162.1| | hypothetical protein LOTGIDRAFT_233898 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_970.1_01292.t1 | gi|284005061|ref|NP_001164689.1| | ependymin-like protein precursor [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_970.1_01292.t1 | gi|260803948|ref|XP_002596851.1| | hypothetical protein BRAFLDRAFT_129108 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_970.1_01292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_970.1_01292.t1 atgattgctttgttagcagtttgtcttctggcggtgagcgttactgctcaagcgccaaggccatgccaatcacctaaaca atgggagggaagagtgttcactgtggatagaagcaaacaatttgagcgatatggcaaaatcagctacgatgagtacgcac caagattccgtataattgaggaggagagagaaggatccaccgaagaattctacgacaggctttaccttcataatgttggc aaagaatacagcttgaatttgaagaccagaaaatgcaacgtgaccagtcttacccgcccattcagaccattcggtgtccc accagaggccaaattcacaggtgaagccacaattggcgccgccggtgtacctggtgaaagtgttgtcatcgaaaattttg atggtgaattcagcgatggtgataaattctttggtgacgtcacatacccagattgtgttccagtagccaatggcgtgttt tctaaagaatttggatttgtcatgaatagtttctttgatatcaacgttggtattgctgacccaatggtttttgtaccacc tccggaatgtgccggccgttaa |
|
Protein
| Protein ID | pfu_aug2.0_970.1_01292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_970.1_01292.t1 MIALLAVCLLAVSVTAQAPRPCQSPKQWEGRVFTVDRSKQFERYGKISYDEYAPRFRIIEEEREGSTEEFYDRLYLHNVG KEYSLNLKTRKCNVTSLTRPFRPFGVPPEAKFTGEATIGAAGVPGESVVIENFDGEFSDGDKFFGDVTYPDCVPVANGVF SKEFGFVMNSFFDINVGIADPMVFVPPPECAGR |
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