Gene
| Gene Model ID | pfu_aug2.0_972.1_08051 |
|---|---|
| Locus | scaffold972.1 : 81916 ... 86537 : + |
| To GenomeBrowser | scaffold972.1:81916..86537 |
| Genes list of scaffold | scaffold972.1 |
| Synonym | pfu_aug1.0_3449.1_08620 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-aminobutyric acid receptor subunit alpha-5 | GO:0016020 GO:0044763 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_972.1_08051.t1 | 1 | 1 | Neur_chan_memb | 65 | 110 | 3.5e-08 | 33.6 | 5.6e-12 | 4.1e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_972.1_08051.t1 | gi|296486592|tpg|DAA28705.1| | TPA: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2-like [Bos taurus] | 2.0e-07 |
| pfu_aug2.0_972.1_08051.t1 | gi|395542841|ref|XP_003773333.1| | PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Sarcophilus harrisii] | 5.0e-07 |
| pfu_aug2.0_972.1_08051.t1 | gi|126331783|ref|XP_001372457.1| | PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Monodelphis domestica] | 5.0e-07 |
| pfu_aug2.0_972.1_08051.t1 | gi|620986519|ref|XP_007663607.1| | PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2, partial [Ornithorhynchus anatinus] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_972.1_08051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_972.1_08051.t1 atgtctagattcctggtttccgtggtggctgtgtgtgtgttaatacagcatggagacgccaaatttccaagcgaagatca gttggctgatttattcaaagattacaattccaatattccaccaacatataatggtacagccgttcatgacaacttacagc tgtacatccttagtattgattccataagtgactcaagtatggaaaatggtaataacgaaaagggcaaaaagagcaatgac aagaagaaaaaggagaaatcccgacaaatagacagaatttcaagaattgcatttccagttgtatttttgattttcaacat tgcttattggactttttatcttgtttgggaaccagtagaaggatga |
|
Protein
| Protein ID | pfu_aug2.0_972.1_08051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_972.1_08051.t1 MSRFLVSVVAVCVLIQHGDAKFPSEDQLADLFKDYNSNIPPTYNGTAVHDNLQLYILSIDSISDSSMENGNNEKGKKSND KKKKEKSRQIDRISRIAFPVVFLIFNIAYWTFYLVWEPVEG |
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