Gene
| Gene Model ID | pfu_aug2.0_972.1_08052 |
|---|---|
| Locus | scaffold972.1 : 92516 ... 94633 : + |
| To GenomeBrowser | scaffold972.1:92516..94633 |
| Genes list of scaffold | scaffold972.1 |
| Synonym | pfu_aug1.0_3449.1_08619 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gamma-aminobutyric acid receptor subunit delta | GO:0005216 GO:0006811 GO:0007154 GO:0044425 GO:0044700 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_972.1_08052.t1 | 1 | 1 | Neur_chan_LBD | 1 | 130 | 9.0e-34 | 116.5 | 7.4e-38 | 1.1e-33 | 116.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_972.1_08052.t1 | gi|632977663|ref|XP_007905472.1| | PREDICTED: gamma-aminobutyric acid receptor subunit delta isoform X2 [Callorhinchus milii] | 2.0e-33 |
| pfu_aug2.0_972.1_08052.t1 | gi|632977661|ref|XP_007905471.1| | PREDICTED: gamma-aminobutyric acid receptor subunit delta isoform X1 [Callorhinchus milii] | 2.0e-33 |
| pfu_aug2.0_972.1_08052.t1 | gi|512857025|ref|XP_002936608.2| | PREDICTED: gamma-aminobutyric acid receptor subunit delta [Xenopus (Silurana) tropicalis] | 2.0e-33 |
| pfu_aug2.0_972.1_08052.t1 | gi|528488921|ref|XP_700099.5| | PREDICTED: gamma-aminobutyric acid receptor subunit delta [Danio rerio] | 4.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_972.1_08052.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_972.1_08052.t1 atgagtttctacttccggcagatatggacagattatcgtcttagatacaacttttctggagtagaagttttggaattaga cactaaaataatccagcaactatgggtgcccgatgtttacgtcatcaacgaaaagcgcgccatttttcatgacatcactt tgccaaacaaactcattaacatctacccagacggcagaatattctacagttcaagattcagtggaacattttcctgcaat atggagctgtacaaataccctttagatcgacagatttgtgatattcagttccaaagctatgcatttagcgaaaacaccat tgttatacgttggcaggaaaacgcttcagttataaatgaaggcctagaactaccacagtttaatctaacaaggcacatac cctttatttgtgacgaaacttttaatggaggtactatactcattttccagtttcatgtgtataagatcaacaacaaagaa acagaacattag |
|
Protein
| Protein ID | pfu_aug2.0_972.1_08052.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_972.1_08052.t1 MSFYFRQIWTDYRLRYNFSGVEVLELDTKIIQQLWVPDVYVINEKRAIFHDITLPNKLINIYPDGRIFYSSRFSGTFSCN MELYKYPLDRQICDIQFQSYAFSENTIVIRWQENASVINEGLELPQFNLTRHIPFICDETFNGGTILIFQFHVYKINNKE TEH |
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