Gene
| Gene Model ID | pfu_aug2.0_972.1_08053 |
|---|---|
| Locus | scaffold972.1 : 104647 ... 106771 : + |
| To GenomeBrowser | scaffold972.1:104647..106771 |
| Genes list of scaffold | scaffold972.1 |
| Synonym | pfu_aug1.0_2447.1_66333 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycine receptor subunit alpha-3 isoform x2 | GO:0005783 GO:0009897 GO:0016021 GO:0016594 GO:0016934 GO:0042391 GO:0045202 GO:0050794 GO:0050896 GO:0050905 GO:0051239 GO:0051260 GO:0051291 GO:0060012 GO:1902476 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_972.1_08053.t1 | 1 | 1 | Neur_chan_LBD | 1 | 135 | 1.6e-35 | 122.2 | 4.9e-39 | 2.4e-35 | 121.6 |
| pfu_aug2.0_972.1_08053.t1 | 2 | 1 | Neur_chan_memb | 166 | 272 | 1.6e-36 | 126.3 | 1.3e-33 | 6.3e-30 | 104.8 |
| pfu_aug2.0_972.1_08053.t1 | 2 | 2 | Neur_chan_memb | 280 | 316 | 1.6e-36 | 126.3 | 3.0e-09 | 1.5e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_972.1_08053.t1 | gi|676473579|ref|XP_009059864.1| | hypothetical protein LOTGIDRAFT_125321 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_972.1_08053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_972.1_08053.t1 atgagcttttattttcgacaaacatggacagactatcgtctccagtataacttttctgatatagacgtaatggagataga cactaagctgattggtgatttatgggtaccggatgtttacatcattaacgagaagaaagccaacttccacgacatcactg taccaaacaaactcatcaacatataccctgacggcagagtattctacagtacacggatcagtggaactttttcctgcaac atgaacctttacaaatatcctttggacagacaaatatgcgaaatcaaatttgaaagttatgcattcagtgcaaatacaat tgttgtaagatggcagccaactgcttctatattgaaggacggtttggaactgccacagtttaacctcacaaaacagaaag cattcatctgtgacggaatttattatggagtaaattatacctgcgttggactaagattttacttagagagaaatagagga tattatgtcacacaggtctacgtacccagtattctagtcattattctgtcctgggtaaacttctggctgaccgtcgatgc cgtaccagcaagaatatcactgggactgctaactgttctgacaatgtctacacaaagtgcttctgccctaaagaatctac agaaggtgtcttacattaaagccttggacgtttggttggcaacctgccttgtgttcgtatttgccgctctcattgagttc gccttcgtcaatgtaacagctagagtggatcagaggagaaagacatctatgaaggcagtgtcaaaatttatggaattaaa gaaaaacaaggaggaggaaaatggtgacatcgatcaaaagaaaaagagaaacagcattttcaaggtggaagaaaaagcaa gaaagatagacagagtgtcaagaattttgtttccagccctgttctttatattcaatcttggatactggacattctatttg atttgggaaccagtggagggatga |
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Protein
| Protein ID | pfu_aug2.0_972.1_08053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_972.1_08053.t1 MSFYFRQTWTDYRLQYNFSDIDVMEIDTKLIGDLWVPDVYIINEKKANFHDITVPNKLINIYPDGRVFYSTRISGTFSCN MNLYKYPLDRQICEIKFESYAFSANTIVVRWQPTASILKDGLELPQFNLTKQKAFICDGIYYGVNYTCVGLRFYLERNRG YYVTQVYVPSILVIILSWVNFWLTVDAVPARISLGLLTVLTMSTQSASALKNLQKVSYIKALDVWLATCLVFVFAALIEF AFVNVTARVDQRRKTSMKAVSKFMELKKNKEEENGDIDQKKKRNSIFKVEEKARKIDRVSRILFPALFFIFNLGYWTFYL IWEPVEG |
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