Gene
| Gene Model ID | pfu_aug2.0_976.1_21304 |
|---|---|
| Locus | scaffold976.1 : 3047 ... 11525 : - |
| To GenomeBrowser | scaffold976.1:3047..11525 |
| Genes list of scaffold | scaffold976.1 |
| Synonym | pfu_aug1.0_3094.1_30341 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| piwi-like protein 1 | GO:0000239 GO:0003727 GO:0003729 GO:0005634 GO:0005844 GO:0005845 GO:0007286 GO:0010468 GO:0019901 GO:0033391 GO:0034584 GO:0034587 GO:0097433 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_976.1_21304.t1 | 1 | 1 | PAZ | 296 | 428 | 5.3e-35 | 119.6 | 6.0e-39 | 8.8e-35 | 118.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_976.1_21304.t1 | gi|704276516|ref|XP_010175090.1| | PREDICTED: piwi-like protein 1 [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_976.1_21304.t1 | gi|701397590|ref|XP_009995931.1| | PREDICTED: piwi-like protein 1 [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_976.1_21304.t1 | gi|632978614|ref|XP_007906012.1| | PREDICTED: piwi-like protein 1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_976.1_21304.t1 | gi|133251534|dbj|BAF49084.1| | piwi-like 1 [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_976.1_21304.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_976.1_21304.t1 atgagtgggagagctagagggagggcaagggggcgtgcacggggccaatcggaggagcaggcccgacgcccgggagaacc atctcagcaagtacagcagcagcagcagcaacaacagatgcctagtgctgctgcccctgccccagtaccggctgctggac caccaacagccagcgggcgtgcctcgtacaggggtggggccaaggaggcgcggcctggaatggccacaggatcaggagat gtaccagaggaacaactggcggccctaaggatcggcacaggggatactaaaggtgtgggtaggagtagggccgattacag gtattcagagccctgtacaaggcctgcccatatctccgacaagagagggaccgctgggggtcaactaccattgctcacca actacttccgtttggagagttcccctgactggcatttatatcagtatcatgtggattttaacccagtagtggattctaag aagatgaggatgggtcttctcatgtctcacgagaatctgattggaaaaaccagggcgtttgatgggcagattctgtacct gccacataagcttcaggaaacggttacagaggtttactctacgactaagcgtgacaatacccagatccgtattactatca cactgaccaacgaactaccccccaccagcccacaagtcatacaggtcttcaatattatctttagacgtgtgctggctatg atcgacatgcagcagataggacggaattacttcaatccaagtctgtcagtagccataccccaacacaagctacaagtaat gccgggcttcattaccagcattttgaagtatgagcaggacaccttactgtgtgcagacatcagccacaagatccttcgtt cagacacagtgctagatatcatgtacgatatgtataaccaagctggagaccgtttctatgacgagtgtatcaagaagttt gttggatccatcgtactgaccagatacaacaacaaaacctatcgatgtgatgatattgactgggaaaagagaccatctca tacattcaaactacgcaacggtgatgagatcacatatgcacagtactatgaaaagagttacggaataaaagttaatgacg taaatcagcctttgctggttagtagacccaagaagaaagatattcgaatgggcagaacagagccaatctatctccttcca gaactttgtgctttgactggacttagtgacgaagttagagcagatttcaatgtaatgaaagatgtaggtgcacatacacg agtcgcccctgatggaaggacaaaaaccctacaaggcttcattaatcaaataaacacgtag |
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Protein
| Protein ID | pfu_aug2.0_976.1_21304.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_976.1_21304.t1 MSGRARGRARGRARGQSEEQARRPGEPSQQVQQQQQQQQMPSAAAPAPVPAAGPPTASGRASYRGGAKEARPGMATGSGD VPEEQLAALRIGTGDTKGVGRSRADYRYSEPCTRPAHISDKRGTAGGQLPLLTNYFRLESSPDWHLYQYHVDFNPVVDSK KMRMGLLMSHENLIGKTRAFDGQILYLPHKLQETVTEVYSTTKRDNTQIRITITLTNELPPTSPQVIQVFNIIFRRVLAM IDMQQIGRNYFNPSLSVAIPQHKLQVMPGFITSILKYEQDTLLCADISHKILRSDTVLDIMYDMYNQAGDRFYDECIKKF VGSIVLTRYNNKTYRCDDIDWEKRPSHTFKLRNGDEITYAQYYEKSYGIKVNDVNQPLLVSRPKKKDIRMGRTEPIYLLP ELCALTGLSDEVRADFNVMKDVGAHTRVAPDGRTKTLQGFINQINT |
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