Gene
| Gene Model ID | pfu_aug2.0_976.1_21305 |
|---|---|
| Locus | scaffold976.1 : 25794 ... 55625 : - |
| To GenomeBrowser | scaffold976.1:25794..55625 |
| Genes list of scaffold | scaffold976.1 |
| Synonym | pfu_aug1.0_3094.1_30338 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_976.1_21305.t3 | 11 | 1 | LRR_6 | 195 | 204 | 1.6e-21 | 73.8 | 10.0 | 15000.0 | -3.6 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 2 | LRR_6 | 211 | 231 | 1.6e-21 | 73.8 | 0.0039 | 5.8 | 7.3 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 1 | LRR_1 | 215 | 225 | 6.4e-12 | 43.7 | 0.1 | 150.0 | 3.0 |
| pfu_aug2.0_976.1_21305.t3 | 6 | 1 | LRR_4 | 215 | 221 | 5.8e-07 | 29.0 | 1.2 | 1800.0 | -1.4 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 3 | LRR_6 | 238 | 260 | 1.6e-21 | 73.8 | 8.4e-05 | 0.13 | 12.4 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 2 | LRR_1 | 242 | 252 | 6.4e-12 | 43.7 | 0.053 | 78.0 | 3.9 |
| pfu_aug2.0_976.1_21305.t3 | 6 | 2 | LRR_4 | 242 | 281 | 5.8e-07 | 29.0 | 0.00034 | 0.51 | 10.0 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 4 | LRR_6 | 266 | 288 | 1.6e-21 | 73.8 | 0.00035 | 0.52 | 10.5 |
| pfu_aug2.0_976.1_21305.t3 | 6 | 3 | LRR_4 | 267 | 310 | 5.8e-07 | 29.0 | 3.4e-05 | 0.05 | 13.2 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 3 | LRR_1 | 269 | 280 | 6.4e-12 | 43.7 | 0.12 | 180.0 | 2.7 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 5 | LRR_6 | 295 | 308 | 1.6e-21 | 73.8 | 0.0086 | 13.0 | 6.2 |
| pfu_aug2.0_976.1_21305.t3 | 6 | 4 | LRR_4 | 295 | 335 | 5.8e-07 | 29.0 | 6.1e-07 | 0.00091 | 18.8 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 4 | LRR_1 | 296 | 307 | 6.4e-12 | 43.7 | 0.0037 | 5.5 | 7.4 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 6 | LRR_6 | 322 | 344 | 1.6e-21 | 73.8 | 6.4e-05 | 0.095 | 12.8 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 5 | LRR_1 | 324 | 336 | 6.4e-12 | 43.7 | 0.0044 | 6.5 | 7.1 |
| pfu_aug2.0_976.1_21305.t3 | 6 | 5 | LRR_4 | 324 | 363 | 5.8e-07 | 29.0 | 0.00094 | 1.4 | 8.6 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 7 | LRR_6 | 352 | 372 | 1.6e-21 | 73.8 | 0.00088 | 1.3 | 9.3 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 6 | LRR_1 | 353 | 364 | 6.4e-12 | 43.7 | 0.42 | 630.0 | 1.1 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 8 | LRR_6 | 378 | 400 | 1.6e-21 | 73.8 | 9.6e-06 | 0.014 | 15.3 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 7 | LRR_1 | 381 | 399 | 6.4e-12 | 43.7 | 0.00098 | 1.4 | 9.1 |
| pfu_aug2.0_976.1_21305.t3 | 6 | 6 | LRR_4 | 381 | 418 | 5.8e-07 | 29.0 | 0.00057 | 0.84 | 9.3 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 9 | LRR_6 | 407 | 428 | 1.6e-21 | 73.8 | 0.0062 | 9.3 | 6.6 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 8 | LRR_1 | 409 | 421 | 6.4e-12 | 43.7 | 0.23 | 340.0 | 1.9 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 10 | LRR_6 | 436 | 446 | 1.6e-21 | 73.8 | 1.8 | 2600.0 | -0.9 |
| pfu_aug2.0_976.1_21305.t3 | 9 | 9 | LRR_1 | 439 | 446 | 6.4e-12 | 43.7 | 5.7 | 8500.0 | -2.3 |
| pfu_aug2.0_976.1_21305.t3 | 1 | 1 | EF-hand_7 | 501 | 554 | 3.1e-09 | 36.8 | 6.9e-12 | 1.0e-08 | 35.1 |
| pfu_aug2.0_976.1_21305.t3 | 2 | 1 | EF-hand_1 | 501 | 525 | 1.6e-08 | 33.2 | 1.8e-07 | 0.00027 | 20.0 |
| pfu_aug2.0_976.1_21305.t3 | 2 | 1 | EF-hand_6 | 501 | 525 | 4.2e-07 | 29.3 | 2.1e-07 | 0.00031 | 20.3 |
| pfu_aug2.0_976.1_21305.t3 | 2 | 1 | EF-hand_8 | 503 | 521 | 2.3e-07 | 30.3 | 0.011 | 17.0 | 5.1 |
| pfu_aug2.0_976.1_21305.t3 | 11 | 11 | LRR_6 | 505 | 514 | 1.6e-21 | 73.8 | 10.0 | 15000.0 | -3.4 |
| pfu_aug2.0_976.1_21305.t3 | 2 | 2 | EF-hand_8 | 514 | 554 | 2.3e-07 | 30.3 | 1.3e-09 | 2.0e-06 | 27.3 |
| pfu_aug2.0_976.1_21305.t3 | 2 | 2 | EF-hand_1 | 536 | 554 | 1.6e-08 | 33.2 | 9.4e-05 | 0.14 | 11.5 |
| pfu_aug2.0_976.1_21305.t3 | 2 | 2 | EF-hand_6 | 542 | 554 | 4.2e-07 | 29.3 | 0.0094 | 14.0 | 5.8 |
Transcript
| Transcript ID | pfu_aug2.0_976.1_21305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_976.1_21305.t1 atgagtctatctaaaccgcacacgaaaaacgtccgtctgtcacaaatggactggttattgactaggtgtgacgaggcgga ggaggaagggtacgtctctgatggggcggaggcggatcaagaagacgaggggtatgatgaagaagtggatccagaggtgg atctgaatagaatgactatcagtcgggctagcagtcggaagtcgcgaccagaaagcagtggttctcgactggagaagtac cacgtatcagacagtgagagtgacgatgagacacgccctaaacccccacgggaggtcacatcagattatgactttacctc tgtcgacattacagacgagaaagcttttgacacagacttggaggtcgaggaggcgacgtccacgtacgaccactcgggga ggacgacgtacatagagggatgtaaaaaagtgggcgtggtcccagcctcctacttcttacgtcacatgcacgaccccaaa ctgagtatgaagcaccacgggctgggatcacatggcatgaaggctatagcaatgtcattagtatccaacacaaagatcct tgagcttgacctcagtgataattggctaggtcacgacggaggtttagctgtgtgtgaaatgctcaaagaaaattgtttta tcacaaatcttaatttatcagacaacagattaggggcccgttgtgcagaaacattgtctaaaatattgcaacaaaatact acgctaactcatgtacgcttgtcaggtaatgattttgatgacaaagctgcagtgcatattgcagatgcattactaaatac aacaaaactagagtacttaaatttaagccataatatattcggtgagatggcaggtctcatcctcggtccagcaatctcgg agaacagctcgcttaaagaactcgatctcagctggaactctttacgcaggaagggagccgtggcagtagctcagggaatc aaacaaaatatatttttacggaaagtgaatttatcgtggaatggttttggcttagatggtgctatagctttaggggatgc attaaaggttaactgtgtattagaagagctcaatgtatcaaataacagaataacaacagaaggttctgttttactcggta aaggtttgtcagctaacgagactctacaggtgctaaagttgggtagaaatcctatgcagacagctggttgttatgcaatt tgtgctgcaattctcagaaatccaaactgtacgttacgagaaatagatttctcagatatattggtgaacaaagatttcga ggacatattcaaacaagtacaagaacagcttccggacattaagatgaggcacggagggatggagccgccaatgaagcccc gcgctcggatccaccccatgatcaaactgacaaactatatagagaaaaacaacttacgattggtggagtttttcaacaag tttgacaaggacggcagtatgagtgttacgtacgaggaatttgaacagggtatagaggagactgggctaaaattaagtca tgaagaagtacagattttattgaaagagttggatagcgacggggacggagaaataaattacagtaagagacaatatgtat ttgtatgtgtaattgtatttatgtgaaacttcatgaacaagtcacaaatatgggagcatgaattcaatgtgagctggtga |
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| Transcript ID | pfu_aug2.0_976.1_21305.t2 |
| Definition | - |
>pfu_aug2.0_976.1_21305.t2 atggaggacggtggtggtaaccagccctcacagagagcggcggggaggcgctggcagatcgagtcccaggaggagcccat ctctgtgattagagaggagacagaggaggagttgaagcaggtggaggcgcagaaccgccctgtgaccagtaatggtagat tacagacccattacccacagcttagccgcccgggcaccagctcctcacgatcacagcgccccgggagtaacaggtccaca gggagaccgggtacaggcagtagaaagacagaggatttggaagccgccatcagacccgaaatgggttcaggaagaagccc taggggattcaaggggaataaaagagaaaaaatgagtctatctaaaccgcacacgaaaaacgtccgtctgtcacaaatgg actggttattgactaggtgtgacgaggcggaggaggaagggtacgtctctgatggggcggaggcggatcaagaagacgag gggtatgatgaagaagtggatccagaggtggatctgaatagaatgactatcagtcgggctagcagtcggaagtcgcgacc agaaagcagtggttctcgactggagaagtaccacgtatcagacagtgagagtgacgatgagacacgccctaaacccccac gggaggtcacatcagattatgactttacctctgtcgacattacagacgagaaagcttttgacacagacttggaggtcgag gaggcgacgtccacgtacgaccactcggggaggacgacgtacatagagggatgtaaaaaagtgggcgtggtcccagcctc ctacttcttacgtcacatgcacgaccccaaactgagtatgaagcaccacgggctgggatcacatggcatgaaggctatag caatgtcattagtatccaacacaaagatccttgagcttgacctcagtgataattggctaggtcacgacggaggtttagct gtgtgtgaaatgctcaaagaaaattgttttatcacaaatcttaatttatcagacaacagattaggggcccgttgtgcaga aacattgtctaaaatattgcaacaaaatactacgctaactcatgtacgcttgtcaggtaatgattttgatgacaaagctg cagtgcatattgcagatgcattactaaatacaacaaaactagagtacttaaatttaagccataatatattcggtgagatg gcaggtctcatcctcggtccagcaatctcggagaacagctcgcttaaagaactcgatctcagctggaactctttacgcag gaagggagccgtggcagtagctcagggaatcaaacaaaatatatttttacggaaagtgaatttatcgtggaatggttttg gcttagatggtgctatagctttaggggatgcattaaaggttaactgtgtattagaagagctcaatgtatcaaataacaga ataacaacagaaggttctgttttactcggtaaaggtttgtcagctaacgagactctacaggtgctaaagttgggtagaaa tcctatgcagacagctggttgttatgcaatttgtgctgcaattctcagaaatccaaactgtacgttacgagaaatagatt tctcagatatattggtgaacaaagatttcgaggacatattcaaacaagtacaagaacagcttccggacattaagatgagg cacggagggatggagccgccaatgaagccccgcgctcggatccaccccatgatcaaactgacaaactatatagagaaaaa caacttacgattggtggagtttttcaacaagtttgacaaggacggcagtatgagtgttacgtacgaggaatttgaacagg gtatagaggagactgggctaaaattaagtcatgaagaagtacagattttattgaaagagttggatagcgacggggacgga gaaataaattacagtgagctggtgagtggacacacaggatttcaggagcagcaacaggaaaatattaacatcattctgac tgctactcaaggaaggcctctcactacatga |
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| Transcript ID | pfu_aug2.0_976.1_21305.t3 |
| Definition | - |
>pfu_aug2.0_976.1_21305.t3 atgagtctatctaaaccgcacacgaaaaacgtccgtctgtcacaaatggactggttattgactaggtgtgacgaggcgga ggaggaagggtacgtctctgatggggcggaggcggatcaagaagacgaggggtatgatgaagaagtggatccagaggtgg atctgaatagaatgatgagtcgtgtaccattaatccgtacacaaactcatccgagtatcaactttagtgtacggagaaag acgtgtagcaaaaagactatcagtcgggctagcagtcggaagtcgcgaccagaaagcagtggttctcgactggagaagta ccacgtatcagacagtgagagtgacgatgagacacgccctaaacccccacgggaggtcacatcagattatgactttacct ctgtcgacattacagacgagaaagcttttgacacagacttggaggtcgaggaggcgacgtccacgtacgaccactcgggg aggacgacgtacatagagggatgtaaaaaagtgggcgtggtcccagcctcctacttcttacgtcacatgcacgaccccaa actgagtatgaagcaccacgggctgggatcacatggcatgaaggctatagcaatgtcattagtatccaacacaaagatcc ttgagcttgacctcagtgataattggctaggtcacgacggaggtttagctgtgtgtgaaatgctcaaagaaaattgtttt atcacaaatcttaatttatcagacaacagattaggggcccgttgtgcagaaacattgtctaaaatattgcaacaaaatac tacgctaactcatgtacgcttgtcaggtaatgattttgatgacaaagctgcagtgcatattgcagatgcattactaaata caacaaaactagagtacttaaatttaagccataatatattcggtgagatggcaggtctcatcctcggtccagcaatctcg gagaacagctcgcttaaagaactcgatctcagctggaactctttacgcaggaagggagccgtggcagtagctcagggaat caaacaaaatatatttttacggaaagtgaatttatcgtggaatggttttggcttagatggtgctatagctttaggggatg cattaaaggttaactgtgtattagaagagctcaatgtatcaaataacagaataacaacagaaggttctgttttactcggt aaaggtttgtcagctaacgagactctacaggtgctaaagttgggtagaaatcctatgcagacagctggttgttatgcaat ttgtgctgcaattctcagaaatccaaactgtacgttacgagaaatagatttctcagatatattggtgaacaaagatttcg aggacatattcaaacaagtacaagaacagcttccggacattaagatgaggcacggagggatggagccgccaatgaagccc cgcgctcggatccaccccatgatcaaactgacaaactatatagagaaaaacaacttacgattggtggagtttttcaacaa gtttgacaaggacggcagtatgagtgttacgtacgaggaatttgaacagggtatagaggagactgggctaaaattaagtc atgaagaagtacagattttattgaaagagttggatagcgacggggacggagaaataaattacagtaagagacaatatgta tttgtatgtgtaattgtatttatgtgaaacttcatgaacaagtcacaaatatgggagcatgaattcaatgtgagctggtg a |
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Protein
| Protein ID | pfu_aug2.0_976.1_21305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_976.1_21305.t1 MSLSKPHTKNVRLSQMDWLLTRCDEAEEEGYVSDGAEADQEDEGYDEEVDPEVDLNRMTISRASSRKSRPESSGSRLEKY HVSDSESDDETRPKPPREVTSDYDFTSVDITDEKAFDTDLEVEEATSTYDHSGRTTYIEGCKKVGVVPASYFLRHMHDPK LSMKHHGLGSHGMKAIAMSLVSNTKILELDLSDNWLGHDGGLAVCEMLKENCFITNLNLSDNRLGARCAETLSKILQQNT TLTHVRLSGNDFDDKAAVHIADALLNTTKLEYLNLSHNIFGEMAGLILGPAISENSSLKELDLSWNSLRRKGAVAVAQGI KQNIFLRKVNLSWNGFGLDGAIALGDALKVNCVLEELNVSNNRITTEGSVLLGKGLSANETLQVLKLGRNPMQTAGCYAI CAAILRNPNCTLREIDFSDILVNKDFEDIFKQVQEQLPDIKMRHGGMEPPMKPRARIHPMIKLTNYIEKNNLRLVEFFNK FDKDGSMSVTYEEFEQGIEETGLKLSHEEVQILLKELDSDGDGEINYSKRQYVFVCVIVFMXNFMNKSQIWEHEFNVSW |
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| Protein ID | pfu_aug2.0_976.1_21305.t2 |
| Definition | - |
>pfu_aug2.0_976.1_21305.t2 MEDGGGNQPSQRAAGRRWQIESQEEPISVIREETEEELKQVEAQNRPVTSNGRLQTHYPQLSRPGTSSSRSQRPGSNRST GRPGTGSRKTEDLEAAIRPEMGSGRSPRGFKGNKREKMSLSKPHTKNVRLSQMDWLLTRCDEAEEEGYVSDGAEADQEDE GYDEEVDPEVDLNRMTISRASSRKSRPESSGSRLEKYHVSDSESDDETRPKPPREVTSDYDFTSVDITDEKAFDTDLEVE EATSTYDHSGRTTYIEGCKKVGVVPASYFLRHMHDPKLSMKHHGLGSHGMKAIAMSLVSNTKILELDLSDNWLGHDGGLA VCEMLKENCFITNLNLSDNRLGARCAETLSKILQQNTTLTHVRLSGNDFDDKAAVHIADALLNTTKLEYLNLSHNIFGEM AGLILGPAISENSSLKELDLSWNSLRRKGAVAVAQGIKQNIFLRKVNLSWNGFGLDGAIALGDALKVNCVLEELNVSNNR ITTEGSVLLGKGLSANETLQVLKLGRNPMQTAGCYAICAAILRNPNCTLREIDFSDILVNKDFEDIFKQVQEQLPDIKMR HGGMEPPMKPRARIHPMIKLTNYIEKNNLRLVEFFNKFDKDGSMSVTYEEFEQGIEETGLKLSHEEVQILLKELDSDGDG EINYSELVSGHTGFQEQQQENINIILTATQGRPLTT |
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| Protein ID | pfu_aug2.0_976.1_21305.t3 |
| Definition | - |
>pfu_aug2.0_976.1_21305.t3 MSLSKPHTKNVRLSQMDWLLTRCDEAEEEGYVSDGAEADQEDEGYDEEVDPEVDLNRMMSRVPLIRTQTHPSINFSVRRK TCSKKTISRASSRKSRPESSGSRLEKYHVSDSESDDETRPKPPREVTSDYDFTSVDITDEKAFDTDLEVEEATSTYDHSG RTTYIEGCKKVGVVPASYFLRHMHDPKLSMKHHGLGSHGMKAIAMSLVSNTKILELDLSDNWLGHDGGLAVCEMLKENCF ITNLNLSDNRLGARCAETLSKILQQNTTLTHVRLSGNDFDDKAAVHIADALLNTTKLEYLNLSHNIFGEMAGLILGPAIS ENSSLKELDLSWNSLRRKGAVAVAQGIKQNIFLRKVNLSWNGFGLDGAIALGDALKVNCVLEELNVSNNRITTEGSVLLG KGLSANETLQVLKLGRNPMQTAGCYAICAAILRNPNCTLREIDFSDILVNKDFEDIFKQVQEQLPDIKMRHGGMEPPMKP RARIHPMIKLTNYIEKNNLRLVEFFNKFDKDGSMSVTYEEFEQGIEETGLKLSHEEVQILLKELDSDGDGEINYSKRQYV FVCVIVFMXNFMNKSQIWEHEFNVSW |
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