Gene
| Gene Model ID | pfu_aug2.0_976.1_21308 |
|---|---|
| Locus | scaffold976.1 : 157632 ... 164295 : - |
| To GenomeBrowser | scaffold976.1:157632..164295 |
| Genes list of scaffold | scaffold976.1 |
| Synonym | pfu_aug1.0_16331.1_32681 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tubulin-folding cofactor b-like | GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_976.1_21308.t1 | 1 | 1 | CAP_GLY | 58 | 126 | 8.0e-15 | 54.3 | 7.9e-19 | 1.2e-14 | 53.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_976.1_21308.t1 | gi|524879550|ref|XP_005096449.1| | PREDICTED: uncharacterized protein LOC101861117 [Aplysia californica] | 0.0 |
| pfu_aug2.0_976.1_21308.t1 | gi|676494645|ref|XP_009066628.1| | hypothetical protein LOTGIDRAFT_229839 [Lottia gigantea] | 1.0e-35 |
| pfu_aug2.0_976.1_21308.t1 | gi|585654882|ref|XP_006815381.1| | PREDICTED: CAP-Gly domain-containing linker protein 1-like [Saccoglossus kowalevskii] | 1.0e-34 |
| pfu_aug2.0_976.1_21308.t1 | gi|390364764|ref|XP_003730678.1| | 6.0e-24 | |
| pfu_aug2.0_976.1_21308.t1 | gi|390343180|ref|XP_003725817.1| | 3.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_976.1_21308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_976.1_21308.t1 atgagtgtccacgaccacgagtctgacgttgatccattcttatgtacttgcgggccttgtaagaaattttggaaggataa ctttagcgatgccgctgatctgcttcgtcagtcctcactgagtagggcaacagatacctctgttcttggacatagaaata gtgttgtcaaaattggcgaccgtgtgatggtccaaggcaaacatccaggcacagtgaaatttgtcggggtggtggatgac aatgctatagctccacaactttatgtcggtgtcaagttggatgataatgtgaattctgtgcacaatggtttgtacaaggg gaagcgttattttcactgcactcccgggcatggagccatggtcagatatacagaagtccgtccacttaaaaccgtccaca aaactccgcctctacagaataactacatgttcccaagctgggaagaggtcagaaaaaggaggaaagaaagagatgaaaaa ctggccgaattatacagtaaagctggtatgtccccaccatcatcagtcacgtctatgccatcaataacaccaacaaaacg cacacctgaacctgtggtgaacattagtgatccaaacgatatggcactaaagattcaggaaagacgtagagaaattgaga agagacggagacaggccagtgccgacagcaaagaaaagaaagaattctggcaattaaaacaacaattcggtggtggtaac gaaggagaaagattagcaagaactctgatgaaactcaaaaacgcctataacgagggacttagcctaacgacacggaaatc gttacaatacgaccctgatatttacgatgatgatatttag |
|
Protein
| Protein ID | pfu_aug2.0_976.1_21308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_976.1_21308.t1 MSVHDHESDVDPFLCTCGPCKKFWKDNFSDAADLLRQSSLSRATDTSVLGHRNSVVKIGDRVMVQGKHPGTVKFVGVVDD NAIAPQLYVGVKLDDNVNSVHNGLYKGKRYFHCTPGHGAMVRYTEVRPLKTVHKTPPLQNNYMFPSWEEVRKRRKERDEK LAELYSKAGMSPPSSVTSMPSITPTKRTPEPVVNISDPNDMALKIQERRREIEKRRRQASADSKEKKEFWQLKQQFGGGN EGERLARTLMKLKNAYNEGLSLTTRKSLQYDPDIYDDDI |
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