Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_98.1_26828
Locus scaffold98.1 : 31326 ... 32830 : +
To GenomeBrowser scaffold98.1:31326..32830
Genes list of scaffold scaffold98.1
Synonym pfu_aug1.0_3730.1_16168

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_98.1_26828.t1 2 1 Acetyltransf_1 111 162 2.9e-06 27.2 6.5e-09 2.4e-05 24.2
pfu_aug2.0_98.1_26828.t1 2 2 Acetyltransf_1 178 190 2.9e-06 27.2 0.36 1300.0 -0.6

Transcript
Transcript IDpfu_aug2.0_98.1_26828.t1
Definition-
>pfu_aug2.0_98.1_26828.t1
atgctgcttaagaaagaagaaaccctgatcaaggaccatgtgttcctaagctgtcttccagaggtagagacgcttcacac
gggccgtgctgttatcatagactatatgtcagagcatcagctgtcccagacctaccacatgatacaggaggctgcccaac
gtggggacggttacggtatagacgaattccactctgagcaggacttcagacgagaaatagctggaagtgactgctttgca
gtaatgtgcaaagaaagcggagaactgatcgctggcttcatacttgccgttagcaagttctaccgcggcgctgcagatgt
cgttgacccgtttatcatcgtgaaaagaactgaaagaaatcaaaaacttggtaaattctgcatgaagaaagccattgagt
actccaagaaacttgcctacaaaggaatgtatgtggacactttctctaataacattgccgtccagaaaatcttggaaaac
ttcggtacatttgtgaaagtaggatttcttccactgggcggaaagttgcaagatggacaattggtcggatcgctgatata
ctacatggacttgacggcgagttga

Protein
Protein IDpfu_aug2.0_98.1_26828.t1
Definition-
>pfu_aug2.0_98.1_26828.t1
MLLKKEETLIKDHVFLSCLPEVETLHTGRAVIIDYMSEHQLSQTYHMIQEAAQRGDGYGIDEFHSEQDFRREIAGSDCFA
VMCKESGELIAGFILAVSKFYRGAADVVDPFIIVKRTERNQKLGKFCMKKAIEYSKKLAYKGMYVDTFSNNIAVQKILEN
FGTFVKVGFLPLGGKLQDGQLVGSLIYYMDLTAS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495