Gene
| Gene Model ID | pfu_aug2.0_98.1_26832 |
|---|---|
| Locus | scaffold98.1 : 128926 ... 153923 : + |
| To GenomeBrowser | scaffold98.1:128926..153923 |
| Genes list of scaffold | scaffold98.1 |
| Synonym | pfu_aug1.0_11517.1_39191 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_98.1_26832.t1 | 2 | 1 | VHS | 3 | 112 | 4.3e-30 | 104.2 | 6.1e-33 | 1.5e-29 | 102.4 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 1 | SH3_1 | 111 | 128 | 7.7e-19 | 66.8 | 9.6e-05 | 0.24 | 10.8 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 1 | SH3_2 | 111 | 131 | 7.4e-14 | 50.9 | 0.00033 | 0.82 | 9.2 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 1 | SH3_9 | 113 | 132 | 1.0e-14 | 53.7 | 0.00012 | 0.3 | 10.7 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 2 | SH3_2 | 292 | 341 | 7.4e-14 | 50.9 | 1.3e-13 | 3.3e-10 | 39.3 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 2 | SH3_1 | 293 | 338 | 7.7e-19 | 66.8 | 8.7e-19 | 2.2e-15 | 55.7 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 2 | SH3_9 | 294 | 342 | 1.0e-14 | 53.7 | 3.4e-14 | 8.4e-11 | 41.2 |
| pfu_aug2.0_98.1_26832.t1 | 2 | 2 | VHS | 431 | 453 | 4.3e-30 | 104.2 | 0.76 | 1900.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_98.1_26832.t1 | gi|676484295|ref|XP_009063300.1| | hypothetical protein LOTGIDRAFT_129863 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_98.1_26832.t1 | gi|524907976|ref|XP_005109097.1| | PREDICTED: signal transducing adapter molecule 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_98.1_26832.t1 | gi|291239797|ref|XP_002739807.1| | PREDICTED: signal transducing adapter molecule 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_98.1_26832.t1 | gi|751201355|ref|XP_011166949.1| | PREDICTED: signal transducing adapter molecule 1 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_98.1_26832.t1 | gi|572308701|ref|XP_006620160.1| | PREDICTED: signal transducing adapter molecule 1-like [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_98.1_26832.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26832.t1 atgaatacaacagaagattggagtttgattatggacatcgttgacaaagtaaatacaacaaacaatgggtccagagattg tctgaggtctttagcaaaaagactgaaccacagagttccctttgttgctatgcaggccctaacgctactggatgcctgtg ttaacaactgtggtagatcattccatctggaagtgtcttctagagactttatttctgaatgtagaactcttataaatcag agggcacatccaaaagttgcacagcgactgcggcacatggttaagaagtggtcagagtctaaggagtttaaagatgatcc ttcgttaagtgatgtaaattggtggaaaggttttaatcaaagaggagaaggactttttcctgcaaattttgtgacatctg atctcacagtggaaccagaaaaagagaagaaagtccagttcaatgaggaggttcaagtaaagacagtagagcctgcccca gaagatgtagaaatagatgagcccccgtttcactgcaatcctgctgtaccaacgttcattcctgacctcagaaattgcca ggtcgggagagaacggctcttagtcatatcttggtctggtacagccttaatcccagcattctatgacagtttgaaatcag atggagctgacttctctgatcctgatgccccagtgaagaagactgccccagtaagtactaatcctgatgtagctaacagt caacaagaagaagatgatattgctaaagccattgctttatccctgcaagaaacggagaccaaatcacaggttaaaaccac gagtctatatcccactggtcttaacacatcatctctgtatgctaccagtagtaaacctagagaggtccgcaaagtacgtg ctttgtatgactttgaggcggcagaagataatgaacttacctttaaagcaggagagtttatcagtgttactgatgatagt gatgtaaattggtggaaaggttttaatcaaagaggagaaggactttttcctgcaaattttgtgacatctgatctcacagt ggaaccagaaaaagagaagaaagttcagttcaatgaggaagtacaagtaaagacagtagagcctgccccagaagatgtag aaatagatgaggagaaaattgatgagatgcttcagcttattcagaatgccgaccctacgggggagacacgccctgacact cccgagatgcttaacctagaggaacgatgtaaaatgatgggaccgcttatagatactgaattagaaaaaatagacaaaaa acatgctgggttgtgtgaattaaataccaaagtgatggaggcattacagatgtaccataatttgatgaaggagaatccca ccccatatacatacaaaggaccccctgggcccataccatatgcccaaccccaggggatccctcctggaatgcagatacct agtcagtccatgtacaatggtcagccccagtatatggccccgcccagtcagccccctatgtcagctcagggtcctatgcc ccccatggcaattccatctcatagttatgctagccagactttcacaagtacaaatagtagccatatgtacaatggaacag taccatcccaaagtgcaatgcaacagccaacctcccagaatcccatgccacaaatggtggcacctagtgttggacaacca caaccaaacattcaaggaaacattgctcctaacattcaaggaaatgttgccccaccacaaaatttacaaaataccgtcac ttcggcacagcagaactttaatactaattataatggacctccgttaggggtcaatcaacagttctatcaacctccaccac agcaacagccattgttatga |
|
Protein
| Protein ID | pfu_aug2.0_98.1_26832.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26832.t1 MNTTEDWSLIMDIVDKVNTTNNGSRDCLRSLAKRLNHRVPFVAMQALTLLDACVNNCGRSFHLEVSSRDFISECRTLINQ RAHPKVAQRLRHMVKKWSESKEFKDDPSLSDVNWWKGFNQRGEGLFPANFVTSDLTVEPEKEKKVQFNEEVQVKTVEPAP EDVEIDEPPFHCNPAVPTFIPDLRNCQVGRERLLVISWSGTALIPAFYDSLKSDGADFSDPDAPVKKTAPVSTNPDVANS QQEEDDIAKAIALSLQETETKSQVKTTSLYPTGLNTSSLYATSSKPREVRKVRALYDFEAAEDNELTFKAGEFISVTDDS DVNWWKGFNQRGEGLFPANFVTSDLTVEPEKEKKVQFNEEVQVKTVEPAPEDVEIDEEKIDEMLQLIQNADPTGETRPDT PEMLNLEERCKMMGPLIDTELEKIDKKHAGLCELNTKVMEALQMYHNLMKENPTPYTYKGPPGPIPYAQPQGIPPGMQIP SQSMYNGQPQYMAPPSQPPMSAQGPMPPMAIPSHSYASQTFTSTNSSHMYNGTVPSQSAMQQPTSQNPMPQMVAPSVGQP QPNIQGNIAPNIQGNVAPPQNLQNTVTSAQQNFNTNYNGPPLGVNQQFYQPPPQQQPLL |
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