Gene
| Gene Model ID | pfu_aug2.0_98.1_26833 |
|---|---|
| Locus | scaffold98.1 : 164823 ... 165725 : - |
| To GenomeBrowser | scaffold98.1:164823..165725 |
| Genes list of scaffold | scaffold98.1 |
| Synonym | pfu_aug1.0_11517.1_39192 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_98.1_26833.t1 | 1 | 1 | Arf | 31 | 158 | 2.1e-08 | 33.6 | 3.3e-11 | 2.7e-08 | 33.2 |
| pfu_aug2.0_98.1_26833.t1 | 1 | 1 | Miro | 36 | 149 | 3.6e-18 | 66.1 | 6.2e-21 | 5.1e-18 | 65.6 |
| pfu_aug2.0_98.1_26833.t1 | 1 | 1 | Ras | 37 | 191 | 8.6e-32 | 109.7 | 1.3e-34 | 1.1e-31 | 109.4 |
| pfu_aug2.0_98.1_26833.t1 | 1 | 1 | MMR_HSR1 | 37 | 141 | 2.4e-08 | 33.9 | 4.2e-11 | 3.4e-08 | 33.4 |
| pfu_aug2.0_98.1_26833.t1 | 1 | 1 | GTP_EFTU | 39 | 174 | 3.3e-10 | 39.7 | 2.2e-11 | 1.8e-08 | 34.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_98.1_26833.t1 | gi|242001386|ref|XP_002435336.1| | GTP-binding protein Rhes, putative [Ixodes scapularis] | 5.0e-27 |
| pfu_aug2.0_98.1_26833.t1 | gi|328719067|ref|XP_001944566.2| | PREDICTED: GTP-binding protein Di-Ras1-like [Acyrthosiphon pisum] | 1.0e-26 |
| pfu_aug2.0_98.1_26833.t1 | gi|113205524|ref|NP_001037874.1| | small GTPase Ras-dva-2 [Xenopus (Silurana) tropicalis] | 7.0e-25 |
| pfu_aug2.0_98.1_26833.t1 | gi|158285791|ref|XP_564861.2| | AGAP007369-PA [Anopheles gambiae str. PEST] | 2.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_98.1_26833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26833.t1 atgaattacctgaaagtatggggagattccatgaagcagttaagacggtccttgtcctcttcttcatctagaagcggttc tagcaccgcagaggaaagacttctcagactcgccgttcttggtgcatctaaggtaggaaaaacatccttgatcaaacagc tcttaaacaaaaaagtggaggacaaatatgacgaaactatagaggacttgtacaagtatacctccacgaaggatcctgac cttcaagtcgacattttagacacctcgggttctgcagaatatcagtcattccgtaggcggaccatgaagaattacgactg tttcctgctggtgttctcgttagaggatgaggcttctttccaggagatgaggaaaatcagagaccagcttatcgccatta ggaaaaaaagtactcctcagattttggtagtcggcaacaaatgtgaccttccatggcggtttatgcccaaagagtccatc gaatcagcagtgaaagaacttggtcacgagtatatggagtgctcagcaaggtgctatgacgacacgaaaattatatttga gagaatcatagacttgagcgacactgatgacgtcttcgctggacaggcgggctatttaggaggggtacatgatggctcta tattcattagaaggatacaaaatgttaacggtgtaccgtctgtagaatgggtacgtctgtactag |
|
Protein
| Protein ID | pfu_aug2.0_98.1_26833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26833.t1 MNYLKVWGDSMKQLRRSLSSSSSRSGSSTAEERLLRLAVLGASKVGKTSLIKQLLNKKVEDKYDETIEDLYKYTSTKDPD LQVDILDTSGSAEYQSFRRRTMKNYDCFLLVFSLEDEASFQEMRKIRDQLIAIRKKSTPQILVVGNKCDLPWRFMPKESI ESAVKELGHEYMECSARCYDDTKIIFERIIDLSDTDDVFAGQAGYLGGVHDGSIFIRRIQNVNGVPSVEWVRLY |
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