Gene
| Gene Model ID | pfu_aug2.0_98.1_26834 |
|---|---|
| Locus | scaffold98.1 : 192341 ... 207120 : - |
| To GenomeBrowser | scaffold98.1:192341..207120 |
| Genes list of scaffold | scaffold98.1 |
| Synonym | pfu_aug1.0_4679.1_16470 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_98.1_26834.t1 | 5 | 1 | GCC2_GCC3 | 47 | 66 | 8.7e-10 | 38.0 | 0.016 | 34.0 | 4.1 |
| pfu_aug2.0_98.1_26834.t1 | 5 | 2 | GCC2_GCC3 | 54 | 83 | 8.7e-10 | 38.0 | 2.2e-07 | 0.00047 | 19.6 |
| pfu_aug2.0_98.1_26834.t1 | 5 | 3 | GCC2_GCC3 | 66 | 102 | 8.7e-10 | 38.0 | 4.7e-09 | 1.0e-05 | 25.0 |
| pfu_aug2.0_98.1_26834.t1 | 5 | 4 | GCC2_GCC3 | 86 | 114 | 8.7e-10 | 38.0 | 6.9e-05 | 0.15 | 11.7 |
| pfu_aug2.0_98.1_26834.t1 | 5 | 5 | GCC2_GCC3 | 103 | 132 | 8.7e-10 | 38.0 | 5.5e-07 | 0.0012 | 18.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_98.1_26834.t1 | gi|672806856|ref|XP_008858466.1| | GCC2 and GCC3 domain containing protein [Entamoeba nuttalli P19] | 9.0e-12 |
| pfu_aug2.0_98.1_26834.t1 | gi|67474282|ref|XP_652890.1| | hypothetical protein [Entamoeba histolytica HM-1:IMSS] | 1.0e-11 |
| pfu_aug2.0_98.1_26834.t1 | gi|167534643|ref|XP_001748997.1| | hypothetical protein [Monosiga brevicollis MX1] | 2.0e-11 |
| pfu_aug2.0_98.1_26834.t1 | gi|471196617|ref|XP_004255265.1| | hypothetical protein EIN_344240 [Entamoeba invadens IP1] | 7.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_98.1_26834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26834.t1 atgttaagatttttgataataatacgccatttttgcattgtgatccaggctcaagctgtactcagaccctttcttctatt atcttatttgtgtcgtaacgatatactatacaacaactgtccgttattcgaaaccgctgcttgtccagtcggtacccaca ggaccagtgctacctcgtgtgctctatgtagtccaggttcttactcagataaggagaactccaaaacatgcaccagttgt ctaccagggctgcatcagtttgattctggtcaaacgtcatgtaaagcttgtccagtcggtacccacaggaccagtgctac ctcgtgtgctctatgtagtccaggttcttactcagataaggagaactccaaaacatgcaccagttgtctaccagggctgc atcagtttgattctggtcaaacgtcatgtaaaggaaaacggtttgtttccacacaaagggagaaattacgaagtatcgaa gaatataaaggaagttcttgtgattcaataacatcataa |
|
Protein
| Protein ID | pfu_aug2.0_98.1_26834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26834.t1 MLRFLIIIRHFCIVIQAQAVLRPFLLLSYLCRNDILYNNCPLFETAACPVGTHRTSATSCALCSPGSYSDKENSKTCTSC LPGLHQFDSGQTSCKACPVGTHRTSATSCALCSPGSYSDKENSKTCTSCLPGLHQFDSGQTSCKGKRFVSTQREKLRSIE EYKGSSCDSITS |
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