Gene
| Gene Model ID | pfu_aug2.0_98.1_26835 |
|---|---|
| Locus | scaffold98.1 : 218785 ... 229230 : - |
| To GenomeBrowser | scaffold98.1:218785..229230 |
| Genes list of scaffold | scaffold98.1 |
| Synonym | pfu_aug1.0_41995.1_05200 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_98.1_26835.t1 | 2 | 1 | SNARE | 34 | 53 | 4.5e-15 | 55.0 | 0.33 | 820.0 | -0.3 |
| pfu_aug2.0_98.1_26835.t1 | 2 | 2 | SNARE | 60 | 121 | 4.5e-15 | 55.0 | 1.8e-18 | 4.5e-15 | 55.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_98.1_26835.t1 | gi|524884495|ref|XP_005098867.1| | PREDICTED: syntaxin-6-like [Aplysia californica] | 2.8026e-45 |
| pfu_aug2.0_98.1_26835.t1 | gi|676483047|ref|XP_009062897.1| | hypothetical protein LOTGIDRAFT_129177 [Lottia gigantea] | 1.99965e-42 |
| pfu_aug2.0_98.1_26835.t1 | gi|611987956|ref|XP_007480972.1| | PREDICTED: syntaxin-6 isoform X5 [Monodelphis domestica] | 1.0e-35 |
| pfu_aug2.0_98.1_26835.t1 | gi|291231242|ref|XP_002735572.1| | PREDICTED: syntaxin-6-like [Saccoglossus kowalevskii] | 2.0e-35 |
| pfu_aug2.0_98.1_26835.t1 | gi|593717532|ref|XP_007105192.1| | PREDICTED: syntaxin-6 isoform X5 [Physeter catodon] | 2.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_98.1_26835.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26835.t1 atgaaagatcagatgtcaagtcaacaaaacaaaggaaagaaagaaggcagtgtcagacaggcattattgaatggtcagaa taagtatgacaaatacacgaggcttgacgaggcaatggagaggtcaaatcaacgttatattgatgatacacagcagcagc aacaaacaatcataagacaacaagatgaacagttggacttgattggaggaagtgtgggagcattaaaacacatgagccat gccattggtaatgagttggaggaacaaaatttaatattagatgagtttgggcatgagatggagaacacagaatctcgact agatactaccatgaaaaaaatagccaaagtcatgcacatgtctaatgattctgttgctgggggtaggaatgggagtgggg agggtatttataataaatggttaccagtatctttaagttga |
|
Protein
| Protein ID | pfu_aug2.0_98.1_26835.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26835.t1 MKDQMSSQQNKGKKEGSVRQALLNGQNKYDKYTRLDEAMERSNQRYIDDTQQQQQTIIRQQDEQLDLIGGSVGALKHMSH AIGNELEEQNLILDEFGHEMENTESRLDTTMKKIAKVMHMSNDSVAGGRNGSGEGIYNKWLPVSLS |
|