Gene
| Gene Model ID | pfu_aug2.0_98.1_26840 |
|---|---|
| Locus | scaffold98.1 : 324139 ... 327860 : - |
| To GenomeBrowser | scaffold98.1:324139..327860 |
| Genes list of scaffold | scaffold98.1 |
| Synonym | pfu_aug1.0_4097.1_16285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_98.1_26840.t1 | 1 | 1 | PLAC8 | 60 | 145 | 4.3e-14 | 52.9 | 7.6e-18 | 1.1e-13 | 51.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_98.1_26840.t1 | gi|676472307|ref|XP_009059450.1| | hypothetical protein LOTGIDRAFT_234087 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_98.1_26840.t1 | gi|198419611|ref|XP_002130054.1| | PREDICTED: cornifelin homolog B-like [Ciona intestinalis] | 8.0e-12 |
| pfu_aug2.0_98.1_26840.t1 | gi|542225214|ref|XP_005451879.1| | PREDICTED: cornifelin-like [Oreochromis niloticus] | 2.0e-11 |
| pfu_aug2.0_98.1_26840.t1 | gi|585645301|ref|XP_002730716.2| | PREDICTED: cornifelin-like [Saccoglossus kowalevskii] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_98.1_26840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26840.t1 atggaaatacgcaacgagaaagagaatgtagtgatgaccggtggatcatttacgacatcagatgacgcagaatcggtagt gacgtcacagcctcaaaatttctgtagagaaacggaccccaaagtgaagcagtcaataagtaaggcggtatttgacgatg cacactgtgagagggattggacatccgggctctgtcagtgccatagagacgaaagaaggaattgttgtactagttgtatg tgttggccgtattacaagtacatggtagccactcgtcttggagagacaccatttatggcccttattccatgtgctgtatt cgccctcagaatcaaaatcaggagtacattcggaataaagggatctctagtgggagacttttggagtactttgtgttgtg aaccgtgtgctgtgtgtcagatgacgcgtgagttagacaagataggaatctga |
|
Protein
| Protein ID | pfu_aug2.0_98.1_26840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26840.t1 MEIRNEKENVVMTGGSFTTSDDAESVVTSQPQNFCRETDPKVKQSISKAVFDDAHCERDWTSGLCQCHRDERRNCCTSCM CWPYYKYMVATRLGETPFMALIPCAVFALRIKIRSTFGIKGSLVGDFWSTLCCEPCAVCQMTRELDKIGI |
|