Gene
| Gene Model ID | pfu_aug2.0_98.1_26845 |
|---|---|
| Locus | scaffold98.1 : 464545 ... 491174 : - |
| To GenomeBrowser | scaffold98.1:464545..491174 |
| Genes list of scaffold | scaffold98.1 |
| Synonym | pfu_aug1.0_41.1_50569 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_98.1_26845.t1 | 1 | 1 | PB1 | 13 | 93 | 4.5e-12 | 45.4 | 6.3e-15 | 9.3e-12 | 44.4 |
| pfu_aug2.0_98.1_26845.t1 | 1 | 1 | C1_1 | 127 | 177 | 1.2e-13 | 50.4 | 1.6e-16 | 2.4e-13 | 49.5 |
| pfu_aug2.0_98.1_26845.t1 | 1 | 1 | Pkinase | 237 | 505 | 0.0 | 206.8 | 0.0 | 0.0 | 206.5 |
| pfu_aug2.0_98.1_26845.t1 | 1 | 1 | Pkinase_Tyr | 238 | 488 | 2.5e-32 | 111.9 | 2.4e-35 | 3.6e-32 | 111.4 |
| pfu_aug2.0_98.1_26845.t1 | 1 | 1 | Kinase-like | 335 | 483 | 2.1e-06 | 26.9 | 2.2e-09 | 3.2e-06 | 26.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_98.1_26845.t1 | gi|241841435|ref|XP_002415344.1| | serine/threonine protein kinase, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_98.1_26845.t1 | gi|674044764|ref|XP_008828336.1| | PREDICTED: protein kinase C iota type isoform X1 [Nannospalax galili] | 0.0 |
| pfu_aug2.0_98.1_26845.t1 | gi|524931230|ref|XP_005069807.1| | PREDICTED: protein kinase C iota type [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_98.1_26845.t1 | gi|532058077|ref|XP_005371734.1| | PREDICTED: protein kinase C iota type [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_98.1_26845.t1 | gi|354482716|ref|XP_003503543.1| | PREDICTED: protein kinase C iota type isoform X1 [Cricetulus griseus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_98.1_26845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26845.t1 atgccgactcaagacagtgaagatccagagggcattaggatgaaggttctatacagtggggccatatttataacaagtat cggcttggaagtcacatatgaggatttctgtgcggagattaaagatatttgtaaatttgacgatcagcaaccgttcacga tgaaatggctggacgaagaaggagatccatgcaccatatcaacacagatagagctggatgaagctataaggttatacgaa atcaacaaagactctgagatcactgtacatgtattccctaacgtaccagagcgacctgggatgccgtgtataggagaaga cagaaatatgtacagaaaaggtgctagacgatggaggaagatctacagagttaatggacatttatttcaagccaaacgat tctctaagaaagcgttttgttcgttttgctcagataggatatggggattgggtcgtcaaggttacagatgtatgcgatgt aaacttgccgtccataaacgatgtcataaacttctcaaagtagtatgtggtgctccggtcatgccaaataatcggcaaga gattaaggaggatgcccagtacttgcccccaccctaccctgtcacagtgaatagcaaagatgctaacggagacacaggaa cctcagtagatgtaggaatcaaggacccgtctaatggtgccgactcccaccaggtgacgatggatcagtttgagttacta cgagttatagggaggggaagctatgcaaaggtcctgatggtggaacaaaaacgaacaaaacgagtctacgcaatgaaagt tatcaaaaaggaattagtcaatgaagatgaggatatagactgggtacaaacagagaagcacgtttttgagacggccacaa actatccattcctggttggattacattcctgtttccagacaccgagtcggttgttttttgtgatagagtttgtaagtggg ggagatctgatgttccatatgcagagacaacgaagattaccggaggaacacgcccgattctactcggcagaaatctgcct cgcccttaacttccttcacgagagaggtattgtatacagagatctgaagttagataacgtattattggatcatgaggggc atatcaagctgacagactacggcatgtgtaaggatgggatgagaccaggggacacaacttctacattttgcggcacccca aattatattgccccagaaatattgcgtggaaatgactatgatttcagtgttgactggtgggctttaggagtgctgatgtt tgagatgttagccggacgttcaccgtttgacgtggtaggaggggcagagaaccctgatcaaaactccgaggattacttat ttcaaataattttggagaagaccatacgtataccaaggtctttatctgttaaggcagcgtctatactcaaaggtttcttg aacaagaatccgagcgagcgtctaggctgtcatcatcagacgggatttgctgatattcagtcacacccatttttccgtac aatcaactgggacctgctggaacagaagcagataaccccgccctacaaaccaccgctacgatctgaacgtgatctggaac atttcgatcctgcatttactgatgaaccggtacaactaacacctgatgatccgtattatgaatctgggtaa |
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Protein
| Protein ID | pfu_aug2.0_98.1_26845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_98.1_26845.t1 MPTQDSEDPEGIRMKVLYSGAIFITSIGLEVTYEDFCAEIKDICKFDDQQPFTMKWLDEEGDPCTISTQIELDEAIRLYE INKDSEITVHVFPNVPERPGMPCIGEDRNMYRKGARRWRKIYRVNGHLFQAKRFSKKAFCSFCSDRIWGLGRQGYRCMRC KLAVHKRCHKLLKVVCGAPVMPNNRQEIKEDAQYLPPPYPVTVNSKDANGDTGTSVDVGIKDPSNGADSHQVTMDQFELL RVIGRGSYAKVLMVEQKRTKRVYAMKVIKKELVNEDEDIDWVQTEKHVFETATNYPFLVGLHSCFQTPSRLFFVIEFVSG GDLMFHMQRQRRLPEEHARFYSAEICLALNFLHERGIVYRDLKLDNVLLDHEGHIKLTDYGMCKDGMRPGDTTSTFCGTP NYIAPEILRGNDYDFSVDWWALGVLMFEMLAGRSPFDVVGGAENPDQNSEDYLFQIILEKTIRIPRSLSVKAASILKGFL NKNPSERLGCHHQTGFADIQSHPFFRTINWDLLEQKQITPPYKPPLRSERDLEHFDPAFTDEPVQLTPDDPYYESG |
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