Gene
| Gene Model ID | pfu_aug2.0_9804.1_16395 |
|---|---|
| Locus | scaffold9804.1 : 1 ... 3490 : + |
| To GenomeBrowser | scaffold9804.1:1..3490 |
| Genes list of scaffold | scaffold9804.1 |
| Synonym | pfu_aug1.0_16270.1_46959 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9804.1_16395.t1 | 3 | 1 | WD40 | 2 | 17 | 1.0e-13 | 50.5 | 0.04 | 150.0 | 2.5 |
| pfu_aug2.0_9804.1_16395.t1 | 3 | 2 | WD40 | 29 | 58 | 1.0e-13 | 50.5 | 9.0e-07 | 0.0033 | 17.2 |
| pfu_aug2.0_9804.1_16395.t1 | 3 | 3 | WD40 | 63 | 100 | 1.0e-13 | 50.5 | 3.8e-10 | 1.4e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9804.1_16395.t1 | gi|676469960|ref|XP_009058700.1| | hypothetical protein LOTGIDRAFT_191849 [Lottia gigantea] | 6.0e-35 |
| pfu_aug2.0_9804.1_16395.t1 | gi|524886730|ref|XP_005099957.1| | PREDICTED: angio-associated migratory cell protein-like [Aplysia californica] | 1.0e-30 |
| pfu_aug2.0_9804.1_16395.t1 | gi|291229422|ref|XP_002734673.1| | PREDICTED: angio-associated migratory cell protein-like [Saccoglossus kowalevskii] | 2.0e-28 |
| pfu_aug2.0_9804.1_16395.t1 | gi|669169583|ref|XP_008620140.1| | hypothetical protein SDRG_15736 [Saprolegnia diclina VS20] | 4.0e-28 |
| pfu_aug2.0_9804.1_16395.t1 | gi|146332449|gb|ABQ22730.1| | angio-associated migratory cell-like protein [Callithrix jacchus] | 8.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_9804.1_16395.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9804.1_16395.t1 acagaactatgctgctactggaactttagcgggaaaattacacatatgggacgtaccaacacagacctgtaggaatacat gtcagcatcctgcaggtgtagtaaagttattgtgggatgccactcagccaatagtttatacagcatgtctagatggcatc attcgcacgtgggactccagaaacggacagctgatctcatcgttagggggtcatcaggattctatattggactttgatct aagcaaagatggtaaaatgttagtatcagtatcagaggatcaaacagccagagtctacaaactgtaa |
|
Protein
| Protein ID | pfu_aug2.0_9804.1_16395.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9804.1_16395.t1 QNYAATGTLAGKLHIWDVPTQTCRNTCQHPAGVVKLLWDATQPIVYTACLDGIIRTWDSRNGQLISSLGGHQDSILDFDL SKDGKMLVSVSEDQTARVYKL |
|