Gene
| Gene Model ID | pfu_aug2.0_981.1_04739 |
|---|---|
| Locus | scaffold981.1 : 195176 ... 206849 : - |
| To GenomeBrowser | scaffold981.1:195176..206849 |
| Genes list of scaffold | scaffold981.1 |
| Synonym | pfu_aug1.0_8.1_00055 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_981.1_04739.t1 | 3 | 1 | Thyroglobulin_1 | 12 | 21 | 1.1e-12 | 47.0 | 0.67 | 5000.0 | -3.1 |
| pfu_aug2.0_981.1_04739.t1 | 2 | 1 | SPARC_Ca_bdg | 27 | 53 | 7.4e-16 | 58.1 | 0.41 | 3100.0 | -1.8 |
| pfu_aug2.0_981.1_04739.t1 | 2 | 2 | SPARC_Ca_bdg | 137 | 253 | 7.4e-16 | 58.1 | 1.0e-19 | 7.4e-16 | 58.1 |
| pfu_aug2.0_981.1_04739.t1 | 3 | 2 | Thyroglobulin_1 | 187 | 195 | 1.1e-12 | 47.0 | 0.18 | 1300.0 | -1.3 |
| pfu_aug2.0_981.1_04739.t1 | 3 | 3 | Thyroglobulin_1 | 275 | 323 | 1.1e-12 | 47.0 | 1.5e-16 | 1.1e-12 | 47.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_981.1_04739.t1 | gi|524872404|ref|XP_005092964.1| | PREDICTED: uncharacterized protein LOC101858330 [Aplysia californica] | 3.0e-34 |
| pfu_aug2.0_981.1_04739.t1 | gi|597771583|ref|XP_007249565.1| | PREDICTED: testican-2-like [Astyanax mexicanus] | 2.0e-31 |
| pfu_aug2.0_981.1_04739.t1 | gi|512923600|ref|XP_004905015.1| | 4.0e-31 | |
| pfu_aug2.0_981.1_04739.t1 | gi|637279193|ref|XP_003218582.2| | PREDICTED: testican-2 isoform X2 [Anolis carolinensis] | 7.0e-31 |
| pfu_aug2.0_981.1_04739.t1 | gi|655866245|ref|XP_008268210.1| | PREDICTED: testican-2 [Oryctolagus cuniculus] | 9.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_981.1_04739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_981.1_04739.t1 gtcattgtttagaggattgtccagtgcactatgtatgtgtgacagaagatggggaacagtcaaaatgtattaagaagaaa gagctcaaggagagccgtctgctcttcaggaaacatatgcgtcagatgcgtagacaaaacaggaacgaaagacgtaggat gagatacgacagatttcagcgtagaaacagaggaggattcgaaaatttcatgagaaaacctctgaaaaaaggaagcagag gttacaaaaaattgaggaagttacaggcacacatgaacggattcaatgtgaagcatgctacattgtctaacaaaaaggtt aaaccaatggatgaaagcaaagctctgctgaacaacttagctgatgtacagactctgctggagaagaatgaagactccca aggtcacccaatttgcacaccaaaaagtatgaatgatcttcgtacccgtatacagggatggtttgtcgttatgcatgaag aacagagagaaaaacatcacagcatgaagcaccatgacaagagatccaagagatctgtccctgatgccaaactaggtgaa tcaaaacagggtaaatgtaagtgtttgaagtcagtaatgtgggccttacaccactttgacaaggactcggaccatcatct cagcgagtcggaggtgttccccatacaaaaacaaaacaaagaggtctgccttaacccacttatgatgtcatgtaaccgtg acaatgatccacgactcagtaaagaagaatggtgctgctgtttcgccgaagacgagccaccttgtgccaagaaggttgag aaacttggacccatgccaatgattggagctttcatccccaagtgcacagccgagggatactacgagagaatgcagtgtca ctccagtaccggatactgctggtgtagtgatctgaacggtaacgaaatcaagggatcccgtctacatatgaagaacggac agcctgaatgcgaaaagaagtacaacgcccttggacaaccgaaaaaactgaaaggatacacaattgtttga |
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Protein
| Protein ID | pfu_aug2.0_981.1_04739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_981.1_04739.t1 HCLEDCPVHYVCVTEDGEQSKCIKKKELKESRLLFRKHMRQMRRQNRNERRRMRYDRFQRRNRGGFENFMRKPLKKGSRG YKKLRKLQAHMNGFNVKHATLSNKKVKPMDESKALLNNLADVQTLLEKNEDSQGHPICTPKSMNDLRTRIQGWFVVMHEE QREKHHSMKHHDKRSKRSVPDAKLGESKQGKCKCLKSVMWALHHFDKDSDHHLSESEVFPIQKQNKEVCLNPLMMSCNRD NDPRLSKEEWCCCFAEDEPPCAKKVEKLGPMPMIGAFIPKCTAEGYYERMQCHSSTGYCWCSDLNGNEIKGSRLHMKNGQ PECEKKYNALGQPKKLKGYTIV |
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