Gene
| Gene Model ID | pfu_aug2.0_984.1_14699 |
|---|---|
| Locus | scaffold984.1 : 149578 ... 159125 : - |
| To GenomeBrowser | scaffold984.1:149578..159125 |
| Genes list of scaffold | scaffold984.1 |
| Synonym | pfu_aug1.0_5788.1_31044 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuromedin-u receptor 2-like isoform x1 | GO:0004930 GO:0007186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_984.1_14699.t1 | 1 | 1 | 7TM_GPCR_Srw | 33 | 329 | 2.3e-09 | 36.8 | 2.0e-12 | 4.9e-09 | 35.7 |
| pfu_aug2.0_984.1_14699.t1 | 1 | 1 | 7TM_GPCR_Srsx | 36 | 326 | 5.4e-12 | 45.4 | 3.5e-15 | 8.6e-12 | 44.7 |
| pfu_aug2.0_984.1_14699.t1 | 1 | 1 | 7tm_1 | 41 | 312 | 0.0 | 176.0 | 0.0 | 0.0 | 175.4 |
| pfu_aug2.0_984.1_14699.t1 | 1 | 1 | 7TM_GPCR_Srv | 43 | 329 | 4.3e-08 | 32.6 | 2.7e-11 | 6.6e-08 | 32.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_984.1_14699.t1 | gi|676454565|ref|XP_009053722.1| | hypothetical protein LOTGIDRAFT_144597, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_984.1_14699.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_984.1_14699.t1 atgcagaattactcggaaattgaagacctgttgctccatatgggccaaaagcgtcgtgatatggtctctactaccatttt acttctggtttattctttgatattttttaccgggaccgtaggaaatatctgcacctgtatcgtgatcgtgaagaacaaat acatgcacactgctaccaacttttatctattcagtttagcgatttcggatgttttaatccttctttttggtttaccgttt gaagcgtactcaatatgggaagcctatccataccgcttcggagaatttttctgcattttcaaagctttcttgacagaaac tacgtcatacgcctccataatcacgatcacagcatttacaatagaacgttacatcgctatttgtttcccgctaaaatctc acagaatcacggacctgagacgctctgcaaaaatcatcatgttcatctgggcgtttgcagctgcttgtgctttgccttat ccaatacatacacgaacgttttattttctgatcaatccggagacagataaacctgtaaaagattcatttatgtgcaatat tcctaaacactggcattctcgcatgagatacatgttccaagtctctactttcattttctttgttttgccaatgactgtga ttatcgttttatacgttttgattgtcattgctcttcgaaaaactacccttgtcagagcaaattcggaagattcaacgaaa agtcatagccataaccattccatgagaaccgtcatcagaatgctattcgccgttgtggtagcgttcttcttatgctgggc accgttccatgttcaaagactttatacattatatgaaaacgattggacagaatattctttggagattcaaagtcacctat tctatgtttcaggagttttgtatttcgtgagctcaacagtgaatccaattctctataatgtaatgtctagacgttacaga caagcattcaaagaaactatattttgttgttttgccaaacgtatgacgaaatatgagaggagtctcttaaattatcatag tatgcgatcagcgtcttgctacagaggttacaggcgcaaaacgactcccgagtaccaattgacacatatcgaacactcta gtttccacgatggttacttgtcacgcaacattgccgatgagatccagagcagtccagcagctataaagcttcttgccaaa agagagacaagggctgttcagttcgttaatggacacttacaacaacaagattatatcgaatccagtcaaccgcttactac ctcaattttaaatcaagaattaaaacaaaatggtctttctaatacatag |
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Protein
| Protein ID | pfu_aug2.0_984.1_14699.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_984.1_14699.t1 MQNYSEIEDLLLHMGQKRRDMVSTTILLLVYSLIFFTGTVGNICTCIVIVKNKYMHTATNFYLFSLAISDVLILLFGLPF EAYSIWEAYPYRFGEFFCIFKAFLTETTSYASIITITAFTIERYIAICFPLKSHRITDLRRSAKIIMFIWAFAAACALPY PIHTRTFYFLINPETDKPVKDSFMCNIPKHWHSRMRYMFQVSTFIFFVLPMTVIIVLYVLIVIALRKTTLVRANSEDSTK SHSHNHSMRTVIRMLFAVVVAFFLCWAPFHVQRLYTLYENDWTEYSLEIQSHLFYVSGVLYFVSSTVNPILYNVMSRRYR QAFKETIFCCFAKRMTKYERSLLNYHSMRSASCYRGYRRKTTPEYQLTHIEHSSFHDGYLSRNIADEIQSSPAAIKLLAK RETRAVQFVNGHLQQQDYIESSQPLTTSILNQELKQNGLSNT |
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