Gene
| Gene Model ID | pfu_aug2.0_988.1_27957 |
|---|---|
| Locus | scaffold988.1 : 2737 ... 3675 : - |
| To GenomeBrowser | scaffold988.1:2737..3675 |
| Genes list of scaffold | scaffold988.1 |
| Synonym | pfu_aug1.0_13335.1_32315 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_988.1_27957.t1 | 1 | 1 | BTB | 26 | 87 | 2.9e-13 | 49.7 | 2.6e-17 | 3.9e-13 | 49.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_988.1_27957.t1 | gi|308472370|ref|XP_003098413.1| | hypothetical protein CRE_06881 [Caenorhabditis remanei] | 1.0e-08 |
| pfu_aug2.0_988.1_27957.t1 | gi|308457392|ref|XP_003091078.1| | hypothetical protein CRE_09861 [Caenorhabditis remanei] | 1.0e-08 |
| pfu_aug2.0_988.1_27957.t1 | gi|308475909|ref|XP_003100172.1| | hypothetical protein CRE_21428 [Caenorhabditis remanei] | 3.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_988.1_27957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_988.1_27957.t1 atgtcagacgaagaagaagaaggagaagaagcacaggttgaaatagaagaatcggaggatttcccttatgaagaaggatt aacagacattgttctgttggtggagaacaaacgtttacatcttaataaaggattcctaatgacatcgtcaccggtattca aggcaatgtttctggggaattttaaagaaaagacatccacagaaatccctctgcctgagaagaattacgaagacatggtg gcatttttgaattgtcttttacaggacgaagaaaacaaactgacaggtttgtacttaattgataactgttga |
|
Protein
| Protein ID | pfu_aug2.0_988.1_27957.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_988.1_27957.t1 MSDEEEEGEEAQVEIEESEDFPYEEGLTDIVLLVENKRLHLNKGFLMTSSPVFKAMFLGNFKEKTSTEIPLPEKNYEDMV AFLNCLLQDEENKLTGLYLIDNC |
|