Gene
| Gene Model ID | pfu_aug2.0_988.1_27959 |
|---|---|
| Locus | scaffold988.1 : 39286 ... 49335 : + |
| To GenomeBrowser | scaffold988.1:39286..49335 |
| Genes list of scaffold | scaffold988.1 |
| Synonym | pfu_aug1.0_39163.1_19706 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_988.1_27959.t1 | 1 | 1 | PB1 | 17 | 89 | 1.4e-08 | 34.2 | 3.2e-12 | 2.3e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_988.1_27959.t1 | gi|585681280|ref|XP_006819842.1| | PREDICTED: sequestosome-1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_988.1_27959.t1 | gi|291236035|ref|XP_002737931.1| | PREDICTED: sequestosome-1-like [Saccoglossus kowalevskii] | 1.99993e-41 |
| pfu_aug2.0_988.1_27959.t1 | gi|641756858|ref|XP_008164676.1| | PREDICTED: sequestosome-1 isoform X3 [Chrysemys picta bellii] | 2.0e-39 |
| pfu_aug2.0_988.1_27959.t1 | gi|564249029|ref|XP_006263595.1| | PREDICTED: sequestosome-1 [Alligator mississippiensis] | 6.0e-33 |
| pfu_aug2.0_988.1_27959.t1 | gi|512948645|ref|XP_004836787.1| | PREDICTED: sequestosome-1 isoform X1 [Heterocephalus glaber] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_988.1_27959.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_988.1_27959.t1 atgtctttaactgtcaaagctacattgatgaagcagggggaccccaaggcggagatcagaagattcgccatccctgctga tgtgtccaccagctatgattacctacagaaaaaagtggccgacatttttccagggctcagcaggggggatttctcattgt tttggaaagatgttgaaggagacttgattttattctcatcaggagaggaactgctggaagctttaggatttgtagaggat ggaatgtttaggatcttcattaaagagagtgagaagacctcccaaccaggaccatctggcagccaatcagagggaagcaa aggagaactacaccctggagtattcatgccaccaccacatttccgtaaatggatggagagatttatgaaacgttggcata acaggaatgagtgtggcggtgaacagagtcaaggaaaggagggagagaaagaccaagcccgaccccaggagggagctgaa gggggacctgacatggactatctgaaaagtgttggggagtcagtagcagctatgcttgatccttttggaattgatgtaga ggtagatgtagagcatagaggtcgtcgtcatgggtgcggtcgtcaaggtcgtggaggtcattgtagcagaggtcgccaag gcaaaagtggatcttgtcacagatcggctgaccccaccaacaaatcagaaaaggaaaaagaacccagagatgaaatgatg gaagaaacaggtgctccaacagaaaaggaaaatactgtccccaaaggaaatacacctcagcctatggagggagacaaaga ggagataactccacagaaaatggagacccaaactccgccctacccaccccaaggaagtttcagtggccccaaaggcaaag attctgaagaatggactgtccttgacaccgatggaccagctcccatgcagtaccctccccagactacaggtgccactgca aacccccctccagttctcatttatcctccaacagatcctaagatagctgaggccctacagcagatgattggaatgggatt ccataacgagggtggctggcttcagcgcctcctggtggagaaagatggcgacatcagtaaggtcctagacgccatacagc ccaaggccaacagaaccccagatggaggctacatggcctaa |
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Protein
| Protein ID | pfu_aug2.0_988.1_27959.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_988.1_27959.t1 MSLTVKATLMKQGDPKAEIRRFAIPADVSTSYDYLQKKVADIFPGLSRGDFSLFWKDVEGDLILFSSGEELLEALGFVED GMFRIFIKESEKTSQPGPSGSQSEGSKGELHPGVFMPPPHFRKWMERFMKRWHNRNECGGEQSQGKEGEKDQARPQEGAE GGPDMDYLKSVGESVAAMLDPFGIDVEVDVEHRGRRHGCGRQGRGGHCSRGRQGKSGSCHRSADPTNKSEKEKEPRDEMM EETGAPTEKENTVPKGNTPQPMEGDKEEITPQKMETQTPPYPPQGSFSGPKGKDSEEWTVLDTDGPAPMQYPPQTTGATA NPPPVLIYPPTDPKIAEALQQMIGMGFHNEGGWLQRLLVEKDGDISKVLDAIQPKANRTPDGGYMA |
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