Gene
| Gene Model ID | pfu_aug2.0_988.1_27960 |
|---|---|
| Locus | scaffold988.1 : 51796 ... 76248 : + |
| To GenomeBrowser | scaffold988.1:51796..76248 |
| Genes list of scaffold | scaffold988.1 |
| Synonym | pfu_aug1.0_4014.1_23461 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_988.1_27960.t1 | 3 | 1 | AF-4 | 16 | 257 | 1.9e-09 | 36.0 | 0.1 | 1500.0 | -3.4 |
| pfu_aug2.0_988.1_27960.t1 | 3 | 2 | AF-4 | 289 | 358 | 1.9e-09 | 36.0 | 1.3e-13 | 1.9e-09 | 36.0 |
| pfu_aug2.0_988.1_27960.t1 | 3 | 3 | AF-4 | 352 | 409 | 1.9e-09 | 36.0 | 0.018 | 270.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_988.1_27960.t1 | gi|676459713|ref|XP_009055390.1| | hypothetical protein LOTGIDRAFT_228539 [Lottia gigantea] | 1.0e-07 |
| pfu_aug2.0_988.1_27960.t1 | gi|585687441|ref|XP_006820494.1| | PREDICTED: AF4/FMR2 family member 3-like [Saccoglossus kowalevskii] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_988.1_27960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_988.1_27960.t1 atggctgagcgcggcagtgacttagatctgaagaaagagcaggctagacagaagagagcagaagaagcgaagcaactgca aaggaagatgaatgatgagctcagcttcacttcagaacaagaggatctgtttggtggagttcggagagttgagacaaggg atgcaacctccatgcgggcagaaaaggcactaggaaagtataactacgagctcatgaaattatctaataagatatgcttg tatggagtggaccagcagccaatgactccgctccctgatcagaaaccagaaaatcctctgatctctggaggacgaggggg agaaggggttcggaaagatctgtttaaagagaagaaacatctacgataccaggaatatctcaaacaaaagcaacagcaag aatcaaatcaaagtgtggagcatccccctgaaatttcacagaggtcattgtctgcaaaaagtcataaggagggaagaagt aacttaccagagtcaaactctgaaaagtctcgttccggagataaagtgttgtcgtctcatcagaggagatcctctaaaga ccgtgcaggacattctgccagcttgacgcagtcatctctatctaagtcacagaaccgtactgaccagcataatgtatcca aaccacaggtccctaaagtaccgtttagtagtcctagccctgtgaagaaaaaccaatcaactgtagtgcacactcataca ccaaaaaaggaggaagttgtgaaaactaaaagtagtcatgacgaaaccaccacctctgtgaccagcaaaattctcaaaga cctaccaccaccaagaaacggcatgattaatggtgcagcaaagcattttaaacctaaaccacctgtaaacttaccaaaac ttgatattaaagaggcccaaaacctagcagaaagtactgatgtagaatctatactaaaggaaatgactcggtctgtgggt gctcccctaactgccattcacaccccacgtaaagaggaggccaaatttccatttcctgccacaccctctaagaaaaacca tttaactgaatctacgcagctcaaaaccaaaatcggaggtcaggatggtactacatcacagacgagggtcaaccatgaaa cagcagaaagccgccagaagtctggtaaagaaaaatcaagtgcggaaactcgtagtgagataagattagtgttagaaaag aggattaaagctcgaggagagataaaaaccatggaccttactgatgtaactaacgtaacagtacgtgccagatgcgaatt gaacaggaaaaggggagtaactcttaaacgaagtttcgttagcattatttatgctaacgatcgatggaggtttaatttgt aa |
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Protein
| Protein ID | pfu_aug2.0_988.1_27960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_988.1_27960.t1 MAERGSDLDLKKEQARQKRAEEAKQLQRKMNDELSFTSEQEDLFGGVRRVETRDATSMRAEKALGKYNYELMKLSNKICL YGVDQQPMTPLPDQKPENPLISGGRGGEGVRKDLFKEKKHLRYQEYLKQKQQQESNQSVEHPPEISQRSLSAKSHKEGRS NLPESNSEKSRSGDKVLSSHQRRSSKDRAGHSASLTQSSLSKSQNRTDQHNVSKPQVPKVPFSSPSPVKKNQSTVVHTHT PKKEEVVKTKSSHDETTTSVTSKILKDLPPPRNGMINGAAKHFKPKPPVNLPKLDIKEAQNLAESTDVESILKEMTRSVG APLTAIHTPRKEEAKFPFPATPSKKNHLTESTQLKTKIGGQDGTTSQTRVNHETAESRQKSGKEKSSAETRSEIRLVLEK RIKARGEIKTMDLTDVTNVTVRARCELNRKRGVTLKRSFVSIIYANDRWRFNL |
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