Gene
| Gene Model ID | pfu_aug2.0_9892.1_09743 |
|---|---|
| Locus | scaffold9892.1 : 1 ... 5735 : - |
| To GenomeBrowser | scaffold9892.1:1..5735 |
| Genes list of scaffold | scaffold9892.1 |
| Synonym | pfu_aug1.0_25020.1_33481 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0000922 GO:0002027 GO:0004683 GO:0005509 GO:0005513 GO:0005516 GO:0005524 GO:0005654 GO:0005814 GO:0005829 GO:0005875 GO:0005876 GO:0005954 GO:0006468 GO:0006898 GO:0007099 GO:0007268 GO:0007605 GO:0007608 GO:0007616 GO:0008049 GO:0008582 GO:0009792 GO:0010880 GO:0016028 GO:0016060 GO:0016061 GO:0016062 GO:0016477 GO:0019901 GO:0019904 GO:0021762 GO:0030017 GO:0030048 GO:0030424 GO:0030425 GO:0030496 GO:0030801 GO:0031432 GO:0031475 GO:0031476 GO:0031489 GO:0031965 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0034704 GO:0035071 GO:0035307 GO:0042052 GO:0042981 GO:0043274 GO:0043277 GO:0044325 GO:0045211 GO:0046331 GO:0046716 GO:0048786 GO:0051296 GO:0051343 GO:0051383 GO:0051489 GO:0051533 GO:0055117 GO:0060278 GO:0060315 GO:0060316 GO:0070062 GO:0070855 GO:0072499 GO:0072542 GO:0072686 GO:0090307 GO:2001020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9892.1_09743.t1 | 2 | 1 | EF-hand_4 | 5 | 73 | 6.0e-08 | 32.3 | 3.9e-05 | 0.037 | 13.7 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 1 | EF-hand_1 | 12 | 40 | 2.3e-33 | 110.9 | 5.6e-12 | 5.2e-09 | 34.7 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 1 | EF-hand_6 | 12 | 41 | 1.9e-27 | 92.6 | 2.7e-12 | 2.5e-09 | 36.2 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 1 | EF-hand_8 | 12 | 38 | 2.1e-26 | 91.2 | 8.0e-05 | 0.074 | 12.6 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 1 | EF-hand_7 | 14 | 73 | 2.2e-31 | 107.7 | 3.0e-18 | 2.7e-15 | 56.2 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 1 | EF-hand_5 | 14 | 36 | 6.5e-23 | 78.9 | 1.4e-09 | 1.3e-06 | 27.4 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 1 | EF-hand_9 | 16 | 75 | 2.6e-12 | 46.4 | 1.8e-10 | 1.6e-07 | 31.0 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 1 | SPARC_Ca_bdg | 16 | 70 | 1.2e-06 | 28.4 | 8.5e-05 | 0.079 | 12.9 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 2 | EF-hand_8 | 25 | 75 | 2.1e-26 | 91.2 | 3.3e-14 | 3.1e-11 | 42.7 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 2 | EF-hand_1 | 48 | 75 | 2.3e-33 | 110.9 | 3.8e-10 | 3.6e-07 | 29.0 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 2 | EF-hand_6 | 48 | 75 | 1.9e-27 | 92.6 | 4.8e-07 | 0.00044 | 19.8 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 2 | EF-hand_5 | 49 | 73 | 6.5e-23 | 78.9 | 9.4e-06 | 0.0087 | 15.3 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 1 | EFhand_Ca_insen | 57 | 70 | 1.7e-06 | 27.9 | 0.9 | 840.0 | 0.0 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 2 | SPARC_Ca_bdg | 79 | 143 | 1.2e-06 | 28.4 | 4.4e-05 | 0.04 | 13.9 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 2 | EFhand_Ca_insen | 79 | 112 | 1.7e-06 | 27.9 | 2.5e-09 | 2.3e-06 | 27.4 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 3 | EF-hand_8 | 82 | 99 | 2.1e-26 | 91.2 | 0.00098 | 0.91 | 9.1 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 2 | EF-hand_4 | 83 | 143 | 6.0e-08 | 32.3 | 2.2e-06 | 0.002 | 17.8 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 3 | EF-hand_1 | 85 | 111 | 2.3e-33 | 110.9 | 1.4e-10 | 1.3e-07 | 30.3 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 3 | EF-hand_6 | 85 | 111 | 1.9e-27 | 92.6 | 5.0e-10 | 4.6e-07 | 29.1 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 2 | EF-hand_7 | 86 | 143 | 2.2e-31 | 107.7 | 2.5e-17 | 2.3e-14 | 53.2 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 3 | EF-hand_5 | 86 | 109 | 6.5e-23 | 78.9 | 7.2e-08 | 6.7e-05 | 22.0 |
| pfu_aug2.0_9892.1_09743.t1 | 2 | 2 | EF-hand_9 | 89 | 144 | 2.6e-12 | 46.4 | 5.0e-05 | 0.047 | 13.6 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 4 | EF-hand_8 | 98 | 143 | 2.1e-26 | 91.2 | 1.5e-15 | 1.4e-12 | 46.9 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 4 | EF-hand_1 | 122 | 143 | 2.3e-33 | 110.9 | 2.4e-08 | 2.2e-05 | 23.3 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 4 | EF-hand_5 | 128 | 142 | 6.5e-23 | 78.9 | 6.1e-06 | 0.0057 | 15.9 |
| pfu_aug2.0_9892.1_09743.t1 | 4 | 4 | EF-hand_6 | 129 | 144 | 1.9e-27 | 92.6 | 0.00035 | 0.32 | 10.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9892.1_09743.t1 | gi|55730374|emb|CAH91909.1| | hypothetical protein [Pongo abelii] | 0.0 |
| pfu_aug2.0_9892.1_09743.t1 | gi|160961487|ref|NP_001104289.1| | calmodulin [Pan troglodytes] | 0.0 |
| pfu_aug2.0_9892.1_09743.t1 | gi|262073073|ref|NP_001159980.1| | calmodulin [Bos taurus] | 0.0 |
| pfu_aug2.0_9892.1_09743.t1 | gi|58865676|ref|NP_001012054.1| | calmodulin-like protein 3 [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_9892.1_09743.t1 | gi|74096311|ref|NP_001027633.1| | calmodulin [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_9892.1_09743.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9892.1_09743.t1 atggcggatgatctcacagaggatcaaatctcagagttcaaggaggcattcagtctttttgacaaggatgggagcgggag tatatctgctgaagaactcggatctgtcatgaggtcgctaggacaaaatcctactgaacaggaattaaaagatctcgtgg aagaaattgatacagatggtaatggagaggtagatttttacgaattcttggccatgatggctaagaaaatgaaagatacc gactcggaagaggaaataaaagaagcgttcagagtgtttgacacaagcgggaaaggctttataactgcgcaggaactgag acacattatgttgaatttcggcgagaaaatggaggaggaggatgccgacgagatggtagccgctgctgatattgacgggg atggggagattaattatgaggaattcattcatcaggaagaatacagacacggacagaaacttctaaatggtgagtttaat gtcattaagaaatag |
|
Protein
| Protein ID | pfu_aug2.0_9892.1_09743.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9892.1_09743.t1 MADDLTEDQISEFKEAFSLFDKDGSGSISAEELGSVMRSLGQNPTEQELKDLVEEIDTDGNGEVDFYEFLAMMAKKMKDT DSEEEIKEAFRVFDTSGKGFITAQELRHIMLNFGEKMEEEDADEMVAAADIDGDGEINYEEFIHQEEYRHGQKLLNGEFN VIKK |
|