Gene
| Gene Model ID | pfu_aug2.0_992.1_08066 |
|---|---|
| Locus | scaffold992.1 : 30816 ... 45036 : + |
| To GenomeBrowser | scaffold992.1:30816..45036 |
| Genes list of scaffold | scaffold992.1 |
| Synonym | pfu_aug1.0_49719.1_20048 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_992.1_08066.t1 | 1 | 1 | BRO1 | 12 | 293 | 3.9e-31 | 108.1 | 4.2e-35 | 6.2e-31 | 107.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_992.1_08066.t1 | gi|524879418|ref|XP_005096385.1| | PREDICTED: BRO1 domain-containing protein BROX-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_992.1_08066.t1 | gi|676460671|ref|XP_009055700.1| | hypothetical protein LOTGIDRAFT_215894 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_992.1_08066.t1 | gi|260830252|ref|XP_002610075.1| | hypothetical protein BRAFLDRAFT_115208 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_992.1_08066.t1 | gi|632960901|ref|XP_007896459.1| | PREDICTED: BRO1 domain-containing protein BROX [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_992.1_08066.t1 | gi|556977765|ref|XP_005996081.1| | PREDICTED: BRO1 domain-containing protein BROX [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_992.1_08066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_992.1_08066.t1 atgcgacagagtcgtttcatggagaaagccgtctcagattacttcagcctcctgatgggtatgatacagccatttgagga cagcgagtcagaaaacaaactcaggagagtcatcaagttcaaatggacaaatacactgcttggaacacctgtcaaagagc agtgggatgctgtgtttgaagctgcctctatgctgataaatgttgctctttggtacacaaaacatgctgcaaaactagct gctaaagaagatggtacacaaacacaccattcattatttgatgatttgatatcgcggctgtctgacaatacagataatgc tgtagatacagatagtcgtgtgttggatgcctatatcaatcagtgtacagctgaggcccaagaagtgacgttagctagag ctatagagatgaagcattcagcaagtttggtggcttcactagcacatgaaacaggccaattgttcaaaagggcagatgat gcattacaaagtctagacgagaaagctgtcggaaagtggaggaaatacttccagcttaaatcagaattttacactgctta tgcatactgttaccatggtgaatcattactggcccaggataaatgtggggaggctatacgaggcctacaggagggagtca aatgttataagaatgcagaagatttgtgtaaggaatatgccataactaaaggtcaagggacctttgccaggccagccaat catatcttcttccgtagacttggtcccgtactgaaacgtaccctggagaaatgtgagagggagaatggcatgatatacca tcagaaagtcgcctacgacccaccaatcctcgagctgaaggccacgtatggtctggcagcaccagaggctttcccagcac ccacacttaacccactgtggtccaaggaggtctacgctaaaatggacacaaaaatggcaccaaaagcagaaaatgaggct gataagaagaaagagaaggacgagaaggagcttcctcctgtaaaggagaaggagacgcccatgtctgagaaagaacccag tacgttaagtggatgtgtagtgtcatag |
|
Protein
| Protein ID | pfu_aug2.0_992.1_08066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_992.1_08066.t1 MRQSRFMEKAVSDYFSLLMGMIQPFEDSESENKLRRVIKFKWTNTLLGTPVKEQWDAVFEAASMLINVALWYTKHAAKLA AKEDGTQTHHSLFDDLISRLSDNTDNAVDTDSRVLDAYINQCTAEAQEVTLARAIEMKHSASLVASLAHETGQLFKRADD ALQSLDEKAVGKWRKYFQLKSEFYTAYAYCYHGESLLAQDKCGEAIRGLQEGVKCYKNAEDLCKEYAITKGQGTFARPAN HIFFRRLGPVLKRTLEKCERENGMIYHQKVAYDPPILELKATYGLAAPEAFPAPTLNPLWSKEVYAKMDTKMAPKAENEA DKKKEKDEKELPPVKEKETPMSEKEPSTLSGCVVS |
|