Gene
| Gene Model ID | pfu_aug2.0_992.1_08071 |
|---|---|
| Locus | scaffold992.1 : 149029 ... 201326 : - |
| To GenomeBrowser | scaffold992.1:149029..201326 |
| Genes list of scaffold | scaffold992.1 |
| Synonym | pfu_aug1.0_13832.1_18042 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_992.1_08071.t1 | 1 | 1 | CH | 252 | 352 | 4.6e-21 | 74.9 | 3.7e-24 | 1.8e-20 | 72.9 |
| pfu_aug2.0_992.1_08071.t1 | 1 | 1 | CAMSAP_CH | 260 | 300 | 4.3e-09 | 35.8 | 1.9e-12 | 9.5e-09 | 34.7 |
| pfu_aug2.0_992.1_08071.t1 | 2 | 1 | DUF3585 | 632 | 680 | 2.3e-39 | 134.4 | 1.0 | 5000.0 | -2.8 |
| pfu_aug2.0_992.1_08071.t1 | 2 | 2 | DUF3585 | 791 | 931 | 2.3e-39 | 134.4 | 4.69435e-43 | 2.3e-39 | 134.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_992.1_08071.t1 | gi|390348126|ref|XP_781775.3| | 0.0 | |
| pfu_aug2.0_992.1_08071.t1 | gi|564254723|ref|XP_006266345.1| | PREDICTED: EH domain-binding protein 1 isoform X4 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_992.1_08071.t1 | gi|507679503|ref|XP_004710252.1| | PREDICTED: EH domain-binding protein 1 isoform X3 [Echinops telfairi] | 0.0 |
| pfu_aug2.0_992.1_08071.t1 | gi|478522980|ref|XP_004435694.1| | PREDICTED: EH domain-binding protein 1 isoform 3 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_992.1_08071.t1 | gi|524880749|ref|XP_005097034.1| | PREDICTED: EH domain-binding protein 1-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_992.1_08071.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_992.1_08071.t1 atgtgcttgtgtagggtgcagtctattgctaatctgattgttatatttgatgatgatatgcagtctgtggccagccttat gagtatagggaagacagatattgggaacttggaggaaatagatgaggaagtgcctgagatagacgacaaggaattctcca cggaactgtcaaaaataacgtcagagttgtctaagcttgataatgacgatgatgacggtaatccgtttggtaaccctttt gacgaggaatgttatgatgatagtgctttcagtgaaccagtatttagtaaagtagcaccaaagacagaatctataaatcc caaagaaaaatcagataatccaaaggaagagtccactaatccatttgatgaggaggaggatgaaggggactcactgaatc cttttgcagaggaagatgaagatgatagtaacaatcctttcatggagtctactccaaaaagtaaagacagatctcgcccg gtgacaaccaaagatgatattagtgccaaagaaagtgtctcaccaatcaagaaaaaacctgccccaccccttcctactgt tagaagcccaaagcttaaagctgcacctaaacccccgtcatctggtaaagataaaagtgatgtatcagaaagtagacctt tatatgaaggtacaccaccaccgacaacacctgaagaaaaacggaaaaaccaaagggaaataactccgcctaaatctgaa gaatcaccccgtcgacgaggtatcaactctagtcagaacctgcttgattggtgtaaggaggtaacaagtggctataaggg tgtgagggtcactaacctcaccacatcatggagaaatgggatggccttctgtgccattgtccactactttagaccagatc tcatcgatttcaagtctttggctcctcatgacatcaaaggaaacaatagaatcgcttttgatgctgctgccaagctaggg attcctcgtgttatagagccgtctgacatggtcctgctagcagtgccagataaacttgccgtaatgacgtatctacacca gcttagggcatactttactcatcaaacgttagaaatccagcaaataggtgtgagtacagttgaaagcacatacaccatag gtgaaatggatgctttagaacaaagggagataaccagagaaatgtatggtaaaggtgtcaacggaactccacggaaaact gtactgacttctactaaagaaaatgtggaaaatatacaagagaataaagtggagaaaaataataaagccaggactccaga tggcagtgttagtgataaaacattttccaaaccagatagtgtagtgactatgtccaaacctgacagtatagttacagtga aatctagtcataatgataacattagtagtgtaaatcaaagcgatagtaaagtgaaggtgacttccgaagaatctacagaa tctcagctagtaggacagggtgatgtttctaggaagatgaaagtgccgttaatgaaggaatcagacaatccgtttgattg tgatagtgaggtgacctctcctgtagaggattccctggtagagaatgatggggtatgggtgatgcagatgggagcagtac atagtgatgatggatcagggtcacctagaccactcagtggctcagtcagtccctccagctcacatagtgggtctcttagt cctagtcatggtacaaggtcacctaaaacttcatctccttctaaagcaaagaaaattgatattaaagatttagactctgt tctcaagaagaatacagagaaacgtacagtagaggtgccttcagaacctattcaacaaatagatgaagagggcaggagaa aatccagacaggaggagttaaaggagcgtgccaagtatttactggagcaggcaagacgtgaggctggtatagggggtagt caggatgatacagacaataataaaacacaggagaaagtagagagacaaccatcggtacaggatgatgaagaaaaacagaa gagattaaaagaaagagctcgacagttgatagaggaagctaggtcaagtataggtcaacccgaggtgcctctccccaaga cagcaagtttacgacgtcccaatgccgagattgcgtcagttatagcccagtctaagacaagctcacgaagaattgtgtcc accagcaatctcttcattataaagtctgaggagagtgttgtgggggagtctctaacgtcatcaagaaccccgtcctcagt gacgtcacacacgggtagtagtgaatactcacatgaggaggaggaggcgtacagtccctcaggttcctcacaaagctctt ttgagtatgaagaccttgtcaggaagaagaaagacgagaatcttcaggatactaaccagtatgtaaaaggagaaatggaa gcgttagaaagagaacaaaaccagatagattcacaagctgctgacctagaaagtaaattacggagggtcatgggaaaaag taaacacaaagtattggaggagaagctgatgcaggaatggttcctattggtcaataagcgtaatgctctgatacgcagac agatgcagcttaatattctagaaaaggaagatgatttagagaggcggtatgagatgctgaacagggaacttaggtccatg atggccatagaggactggcaaaagacggaggcccagagacaccgtgaaaagttattactggaggaattggtagatatagt taacaagagagacgagatggtccagcatctagactcacaggagagagcgatagaagatgatgaacaattagaccggcgtg ttacagagggtaaaattatacaacaaagtaaaaaggaatgttccatccagtaa |
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Protein
| Protein ID | pfu_aug2.0_992.1_08071.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_992.1_08071.t1 MCLCRVQSIANLIVIFDDDMQSVASLMSIGKTDIGNLEEIDEEVPEIDDKEFSTELSKITSELSKLDNDDDDGNPFGNPF DEECYDDSAFSEPVFSKVAPKTESINPKEKSDNPKEESTNPFDEEEDEGDSLNPFAEEDEDDSNNPFMESTPKSKDRSRP VTTKDDISAKESVSPIKKKPAPPLPTVRSPKLKAAPKPPSSGKDKSDVSESRPLYEGTPPPTTPEEKRKNQREITPPKSE ESPRRRGINSSQNLLDWCKEVTSGYKGVRVTNLTTSWRNGMAFCAIVHYFRPDLIDFKSLAPHDIKGNNRIAFDAAAKLG IPRVIEPSDMVLLAVPDKLAVMTYLHQLRAYFTHQTLEIQQIGVSTVESTYTIGEMDALEQREITREMYGKGVNGTPRKT VLTSTKENVENIQENKVEKNNKARTPDGSVSDKTFSKPDSVVTMSKPDSIVTVKSSHNDNISSVNQSDSKVKVTSEESTE SQLVGQGDVSRKMKVPLMKESDNPFDCDSEVTSPVEDSLVENDGVWVMQMGAVHSDDGSGSPRPLSGSVSPSSSHSGSLS PSHGTRSPKTSSPSKAKKIDIKDLDSVLKKNTEKRTVEVPSEPIQQIDEEGRRKSRQEELKERAKYLLEQARREAGIGGS QDDTDNNKTQEKVERQPSVQDDEEKQKRLKERARQLIEEARSSIGQPEVPLPKTASLRRPNAEIASVIAQSKTSSRRIVS TSNLFIIKSEESVVGESLTSSRTPSSVTSHTGSSEYSHEEEEAYSPSGSSQSSFEYEDLVRKKKDENLQDTNQYVKGEME ALEREQNQIDSQAADLESKLRRVMGKSKHKVLEEKLMQEWFLLVNKRNALIRRQMQLNILEKEDDLERRYEMLNRELRSM MAIEDWQKTEAQRHREKLLLEELVDIVNKRDEMVQHLDSQERAIEDDEQLDRRVTEGKIIQQSKKECSIQ |
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