Gene
| Gene Model ID | pfu_aug2.0_995.1_18003 |
|---|---|
| Locus | scaffold995.1 : 1 ... 7740 : + |
| To GenomeBrowser | scaffold995.1:1..7740 |
| Genes list of scaffold | scaffold995.1 |
| Synonym | pfu_aug1.0_871.1_51100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_995.1_18003.t1 | 1 | 1 | Fibrinogen_C | 1 | 167 | 0.0 | 184.5 | 0.0 | 0.0 | 184.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_995.1_18003.t1 | gi|118405032|ref|NP_001072519.1| | fibrinogen C domain-containing protein 1 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_995.1_18003.t1 | gi|432884772|ref|XP_004074580.1| | PREDICTED: fibrinogen C domain-containing protein 1-like isoform X1 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_995.1_18003.t1 | gi|617389381|ref|XP_007548985.1| | PREDICTED: fibrinogen C domain-containing protein 1-like [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_995.1_18003.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18003.t1 gtttttcaaaggcgattggatggatctcagaactttcaacttagctatttagaatatgctagaggatttggagacgtcaa ggaagaattttggttagggaatgagctccttcacaaactgacgaagaataagtcttgcaaacttcgaattgacctaaagg attttcagaattcaaccagatatgctctgtatgacgacttcgtggttgatgacagcagcaacgggtacaagttgacacta gggaaatacaccggaaatgcaggtgattctatgcgccatcatgttggacagaaattttctactgctgacaaggatcagga tagttcgaaaaataactgcgcaagcacctacaagggagcatggtggtatggtgactgtcacacttcaaatctcaatggaa aatatcttcgaggaaagcattccacctttgctgatggcattgaatggaattcatggaaaggttattactattctctgaaa gaaacaaggatgatgctgcgctgtcagtga |
|
Protein
| Protein ID | pfu_aug2.0_995.1_18003.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18003.t1 VFQRRLDGSQNFQLSYLEYARGFGDVKEEFWLGNELLHKLTKNKSCKLRIDLKDFQNSTRYALYDDFVVDDSSNGYKLTL GKYTGNAGDSMRHHVGQKFSTADKDQDSSKNNCASTYKGAWWYGDCHTSNLNGKYLRGKHSTFADGIEWNSWKGYYYSLK ETRMMLRCQ |
|