Gene
| Gene Model ID | pfu_aug2.0_995.1_18004 |
|---|---|
| Locus | scaffold995.1 : 42156 ... 43850 : + |
| To GenomeBrowser | scaffold995.1:42156..43850 |
| Genes list of scaffold | scaffold995.1 |
| Synonym | pfu_aug1.0_24244.1_54964 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_995.1_18004.t1 | 1 | 1 | RVT_1 | 225 | 373 | 1.3e-09 | 37.7 | 1.5e-13 | 2.2e-09 | 36.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_995.1_18004.t1 | gi|512879270|ref|XP_004919487.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_995.1_18004.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18004.t1 atgaagagaaggaaagttccctctgctattaatttacctgaatcagttggagaaaagcgtgatgttttaaacctttctga ccattcactttccaaaagtgaacacagtcttctgtccaaaggactttccttctgtcccatacctagggacatcaacgaaa gacgagttagagaggatgttcgagcattttttaggcgtctccgtttgaaggaatatttcagcagacctaaaagtagacga cttgatgacatcgctgaggagtcttctagtgatgacgaacttgatcaggatgacgcccaaaatgaatatcacctaaaaga caatgattcgatagtaataaaaaaagcggacaaaggatccatagtcgtagttctgaacaaatcagatcatattgacgaag ctctcaggcaactctcgtcgccttccttttacgagaagctagactctgaccctactcttgaattttcaagtctcatactt tcagaccttacagacatgaaaaataacaatgaaatagatgaggatgtttttgaatacctctgtcccgagaacccacgacc gggtcaattttatctcctaccaaaaatacacaaagaaggtatgcctggtcgtcctatcgtcagtgctataggtcatccca ctgaaaaaatatcacaatttttagactatcacctcaaggatcatgttgaaaaattaccgtcatatctgaaagacaccaca gattacataaagaaaacacccagtcagaatctacccactggcacgctccttgtcaccatggacgttacttcactttacac gaacatccctcatgaggaaggaatcgaaacatgcagagaagtaagggacctaagacaaaacaaacgacaatctacggaat ctcttgtgaaactcctcgagcgtactcttaagctgaacaactttattttcaacggtgatcattacctacagataaatggt acttcgatgggcacaaaaatggcaccgtcgtatgctaacatttacatgggggacttcgaagatcgtctactccgacaggc ccctagcaaaccactcagttggttgcgattcattgatgacatagagatgaagttgactgagggtagagaaagacttgacg aattcattgatttcaagaataaattccatccaatttactgtagaaatctctga |
|
Protein
| Protein ID | pfu_aug2.0_995.1_18004.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18004.t1 MKRRKVPSAINLPESVGEKRDVLNLSDHSLSKSEHSLLSKGLSFCPIPRDINERRVREDVRAFFRRLRLKEYFSRPKSRR LDDIAEESSSDDELDQDDAQNEYHLKDNDSIVIKKADKGSIVVVLNKSDHIDEALRQLSSPSFYEKLDSDPTLEFSSLIL SDLTDMKNNNEIDEDVFEYLCPENPRPGQFYLLPKIHKEGMPGRPIVSAIGHPTEKISQFLDYHLKDHVEKLPSYLKDTT DYIKKTPSQNLPTGTLLVTMDVTSLYTNIPHEEGIETCREVRDLRQNKRQSTESLVKLLERTLKLNNFIFNGDHYLQING TSMGTKMAPSYANIYMGDFEDRLLRQAPSKPLSWLRFIDDIEMKLTEGRERLDEFIDFKNKFHPIYCRNL |
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