Gene
| Gene Model ID | pfu_aug2.0_995.1_18007 |
|---|---|
| Locus | scaffold995.1 : 92686 ... 130370 : + |
| To GenomeBrowser | scaffold995.1:92686..130370 |
| Genes list of scaffold | scaffold995.1 |
| Synonym | pfu_aug1.0_97.1_57971 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| non-symbiotic hemoglobin class 1 | GO:0005488 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_995.1_18007.t1 | 1 | 1 | Globin | 17 | 120 | 3.8e-11 | 43.3 | 7.9e-15 | 5.9e-11 | 42.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_995.1_18007.t1 | gi|590682620|ref|XP_007041393.1| | Hemoglobin-2 [Theobroma cacao] | 8.0e-12 |
| pfu_aug2.0_995.1_18007.t1 | gi|567860986|ref|XP_006423147.1| | hypothetical protein CICLE_v10029451mg [Citrus clementina] | 2.0e-11 |
| pfu_aug2.0_995.1_18007.t1 | gi|676465425|ref|XP_009057240.1| | hypothetical protein LOTGIDRAFT_233247 [Lottia gigantea] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_995.1_18007.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18007.t1 atgggatgtacctcggggaggatggtagcgccatctatgacagagacggagaaaactttgatcaaagactcatggtcact gatagcaggcgaaaaagaccttggtgacgtgggtctgataatgtttaacaagttgtttcaagataattcaagtctacgat ccttgtactcatttctgcgtgatgataacgttaatgatgacgtaaacggcaaacttcgtagccatggcaaaggtgtgatg gaagttgttgatatagcagtatcaagtatagacgatctgaggggattacatccgattgttgttgatttaggatgcagaca ttacaaatatggagtccagaaatctcatcttcaaaatacagagacggtaaggattgagcaacaaagctggttccgaaata ctctacgctcgccgggacgaaagtccgaagagctaatgtcatatcctcagcgtcgtcgttgtcgtcgttgtcgtcgcgtc gtcgacgtcgttgtcgtcgtccgtagacaaaactttaacctgggctatatctcttcaaccataagagaagacagtgtcct cgtggtcgtcactgtgaacaccctggttctgcgccctactgccgcctgcgctatgacgtccttcggtcgcatcgcaattt cggtctgtgtttcgcatactttctacctgtttcggcctgtcggtaagagtttaatttatacactggaaacatccatcggg gcaggattcaacgaggacatgaggcgaagctggctcaagttttttgctgttttgagtgttagtttctctgaaggacttga caaaggccagcatttagtggaaaacgatggatga |
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Protein
| Protein ID | pfu_aug2.0_995.1_18007.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18007.t1 MGCTSGRMVAPSMTETEKTLIKDSWSLIAGEKDLGDVGLIMFNKLFQDNSSLRSLYSFLRDDNVNDDVNGKLRSHGKGVM EVVDIAVSSIDDLRGLHPIVVDLGCRHYKYGVQKSHLQNTETVRIEQQSWFRNTLRSPGRKSEELMSYPQRRRCRRCRRV VDVVVVVRRQNFNLGYISSTIREDSVLVVVTVNTLVLRPTAACAMTSFGRIAISVCVSHTFYLFRPVGKSLIYTLETSIG AGFNEDMRRSWLKFFAVLSVSFSEGLDKGQHLVENDG |
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